Rv0404 - fatty-acid-CoA ligase fadD30

Expression: Most Significant Conditions for Rv0404

Protein Domains

Gene Information
Locus	Rv0404
Symbol	fadD30
Gene Name	fatty-acid-CoA ligase fadD30
Location	483977 - 485734 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1758 bp Protein:586 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	14275
Related Genes	MT0417
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv0404
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv0404 Transcript 1
MSVISTLRDRATTTPSDEAFVFMDYDTKTGDQIDRMTWSQLYSRVTAVSAYLISYGRHAD
RRRTAAISAPQGLDYVAGFLGALCAGWTPVPLPEPLGSLRDKRTGLAVLDCAADVVLTTS
QAETRVRATIATHGASVTTPVIALDTLDEPSGDNCDLDSQLSDWSSYLQYTSGSTANPRG
VVLSMRNVTENVDQIIRNYFRHEGGAPRLPSSVVSWLPLYHDMGLMVGLFIPLFVGCPVI
LTSPEAFIRKPARWMQLLAKHQAPFSAAPNFAFDLAVAKTSEEDMAGLDLGHVNTIINGA
EQVQPNTITKFLRRFRPYNLMPAAVKPSYGMAEAVVYLATTKAGSPPTSTEFDADSLARG
HAELSTFETERATRLIRYHSDDKEPLLRIVDPDSNIELGPGRIGEIWIHGKNVSTGYHNA
DDALNRDKFQASIREASAGTPRSPWLRTGDLGFIVGDEFYIVGRMKDLIIQDGVNHYPDD
IETTVKEFTGGRVAAFSVSDDGVEHLVIAAEVRTEHGPDKVTIMDFSTIKRLVVSALSKL
HGLHVTDFLLVPPGALPKTTSGKISRAACAKQYGANKLQRVATFP*

Genomic Sequence

>Rv0404
ATGTCTGTTATATCCACGTTGCGCGACCGTGCGACCACGACTCCAAGCGACGAAGCCTTT
GTGTTCATGGATTACGACACAAAAACCGGCGACCAAATTGACCGAATGACGTGGAGTCAA
TTATATTCTCGCGTCACCGCCGTGTCTGCGTATCTAATAAGTTATGGCCGGCATGCTGAC
CGACGAAGGACCGCAGCGATATCAGCTCCGCAAGGTCTGGACTATGTTGCAGGATTTCTA
GGAGCACTGTGCGCCGGATGGACGCCGGTTCCGTTACCAGAACCGCTGGGCAGCCTACGC
GATAAGCGGACTGGACTGGCTGTACTCGACTGTGCCGCCGACGTCGTGCTGACGACGTCG
CAAGCCGAAACGCGGGTCAGGGCCACGATAGCTACACATGGGGCGTCTGTAACTACGCCG
GTCATAGCGTTGGATACATTGGACGAGCCATCCGGAGATAACTGTGATCTCGATTCTCAA
CTATCAGACTGGAGTTCGTATTTGCAGTATACTTCGGGTTCAACGGCCAACCCCCGTGGT
GTGGTTTTATCCATGCGTAACGTTACGGAAAATGTCGACCAAATTATCCGTAACTATTTT
CGCCATGAGGGCGGCGCGCCGAGGTTGCCCAGCTCGGTCGTTTCGTGGTTGCCGCTTTAC
CATGACATGGGTTTAATGGTTGGCCTCTTTATTCCGTTGTTTGTCGGATGTCCGGTTATC
CTGACGAGCCCAGAGGCATTTATCCGTAAGCCTGCCAGATGGATGCAACTGCTTGCTAAA
CACCAGGCGCCATTTTCGGCCGCGCCGAACTTCGCATTCGATTTGGCCGTCGCTAAAACT
TCCGAAGAGGACATGGCGGGGCTGGATTTAGGCCACGTAAATACAATAATCAACGGCGCG
GAGCAGGTACAGCCAAATACAATAACCAAATTCCTCCGCCGGTTCCGTCCCTACAATTTG
ATGCCCGCAGCGGTCAAGCCATCATACGGGATGGCTGAAGCGGTGGTTTACCTGGCGACG
ACGAAGGCGGGATCACCTCCAACGTCAACCGAGTTCGATGCTGATAGCTTGGCTCGAGGC
CACGCGGAGCTAAGTACTTTCGAAACTGAGCGTGCAACGCGTTTAATACGCTACCACAGC
GACGACAAGGAACCGTTGCTTCGGATTGTCGATCCGGACTCGAATATCGAGCTCGGACCG
GGACGTATCGGCGAGATTTGGATTCACGGTAAGAATGTGTCTACCGGATATCACAATGCA
GACGACGCGCTCAATCGAGATAAGTTCCAGGCCAGCATCCGGGAGGCCTCTGCGGGAACG
CCAAGGTCGCCGTGGCTTCGCACGGGAGACTTGGGATTCATAGTAGGAGATGAGTTCTAC
ATCGTCGGCCGTATGAAAGATCTCATTATCCAAGACGGTGTAAACCATTATCCCGATGAT
ATCGAAACTACGGTCAAGGAGTTTACCGGTGGCCGGGTCGCGGCATTTTCAGTATCCGAC
GACGGGGTGGAGCATTTGGTCATTGCGGCCGAGGTAAGGACTGAGCATGGGCCCGATAAA
GTGACTATTATGGATTTCTCGACGATCAAAAGGCTGGTCGTATCGGCGTTGTCGAAATTA
CATGGCCTGCATGTAACAGATTTTCTTCTGGTACCGCCCGGGGCGCTACCGAAGACCACC
AGCGGAAAGATTAGCCGGGCGGCATGCGCAAAGCAGTACGGAGCAAATAAGTTGCAACGA
GTAGCAACGTTCCCATGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv0757	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. SB. Walters, E. Dubnau et al. The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis. Mol. Microbiol. 2006