Rv0702 - 50S ribosomal protein L4 rplD
Protein Domains

Gene Information
LocusRv0702
SymbolrplD
Gene Name50S ribosomal protein L4 rplD
Location801462 - 802133 (+)
SpeciesMycobacterium tuberculosis H37Rv complete genome.
LengthGene:672 bp
Protein:224 aa
External LinksTuberculist
Target Gene Information
String Protein-Protein Interactions
STITCH Chemical-Protein Interactions
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Orthologs
Orthogroup Number204
Related GenesAcel_0307 BL1579 CE0523 cg0596 DIP0474 jk1832 MAP4162 MAV_4470 Mkms_1031 ML1862 Mmcs_1014 MSMEG_1437 MT0729 MUL_0791 Mvan_1306 nfa7340 PPA1862 RHA1_ro06134 SAV4927
Transcriptional Regulation
Operons View gene in operon browser
Regulatory Network
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Expression Correlation Genes with Correlated Expression
Scatterplot of Gene Expression

Sequence
Proteins
Genomic Sequence
Community Annotations Pending Curatorial Review
FieldValueStatusCreatorDate
InteractionPhysicalInteraction Rv0709activeravirajsoni2012-10-05
Co-expression (Functional linkage)
authors,R. Wang,JT. Prince,EM. Marcotte Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias. Genome Res. 2005
InteractionPhysicalInteraction Rv0708activeravirajsoni2012-10-05
Co-expression (Functional linkage)
authors,R. Wang,JT. Prince,EM. Marcotte Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias. Genome Res. 2005
InteractionPhysicalInteraction Rv0707activeravirajsoni2012-10-05
Co-expression (Functional linkage)
authors,R. Wang,JT. Prince,EM. Marcotte Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias. Genome Res. 2005
InteractionPhysicalInteraction Rv0705activeravirajsoni2012-10-05
Co-expression (Functional linkage)
authors,R. Wang,JT. Prince,EM. Marcotte Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias. Genome Res. 2005
InteractionPhysicalInteraction Rv0703activeravirajsoni2012-10-05
Co-expression (Functional linkage)
authors,R. Wang,JT. Prince,EM. Marcotte Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias. Genome Res. 2005
InteractionRegulatory Rv0703activeravirajsoni2012-10-05
ChIP (Physical interaction)
authors,S. Rodrigue,J. Brodeur,PE. Jacques,AL. Gervais,R. Brzezinski,L. Gaudreau Identification of mycobacterial sigma factor binding sites by chromatin immunoprecipitation assays. J. Bacteriol. 2007
InteractionTranscription Rv0717activeravirajsoni2012-10-05
Physical interaction
authors,M. Strong,TG. Graeber,M. Beeby,M. Pellegrini,MJ. Thompson,TO. Yeates,D. Eisenberg Visualization and interpretation of protein networks in Mycobacterium tuberculosis based on hierarchical clustering of genome-wide functional linkage maps. Nucleic Acids Res. 2003
InteractionRegulatedBy Rv0348activeyamir.moreno2012-10-05
Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments..
B. Abomoelak, EA. Hoye et al. mosR, a novel transcriptional regulator of hypoxia and virulence in Mycobacterium tuberculosis. J. Bacteriol. 2009
InteractionRegulatedBy Rv1221activeyamir.moreno2012-10-05
Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments..
R. Manganelli, MI. Voskuil et al. The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages. Mol. Microbiol. 2001