Rv1080c - transcription elongation factor greA

Expression: Most Significant Conditions for Rv1080c

Protein Domains

Gene Information
Locus	Rv1080c
Symbol	greA
Gene Name	transcription elongation factor greA
Location	1205304 - 1205798 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:495 bp Protein:165 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	32678
Related Genes	Acel_1887 BL1015 CE1050 cg1123 DIP0925 jk1471 MAP1027c MAV_1204 Mkms_4219 ML2393 Mmcs_4144 MSMEG_5263 MT1111 MUL_0200 Mvan_4668 nfa48260 PPA0561 SAV3301
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv1080c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv1080c Transcript 1
MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGYHAAREEQGQQ
EARIRQLQDLLSNAKVGEAPKQSGVALPGSVVKVYYNGDKSDSETFLIATRQEGVSDGKL
EVYSPNSPLGGALIDAKVGETRSYTVPNGSTVSVTLVSAEPYHS*

Genomic Sequence

>Rv1080c
ATGACGGATACTCAAGTCACCTGGTTGACCCAAGAGTCACATGACCGACTCAAAGCAGAG
CTCGACCAGCTGATTGCGAATCGCCCGGTCATCGCCGCCGAAATCAACGACCGCCGCGAA
GAAGGCGACCTGCGCGAGAACGGCGGATACCACGCCGCCCGCGAGGAGCAGGGCCAGCAG
GAGGCCCGCATTCGCCAGCTGCAGGACTTGCTCAGCAACGCAAAGGTTGGCGAGGCACCC
AAGCAATCCGGCGTCGCATTACCCGGTTCTGTGGTCAAGGTGTACTACAACGGCGACAAG
TCGGACAGCGAAACGTTCCTCATCGCCACCCGCCAGGAGGGCGTCAGCGACGGCAAGCTC
GAGGTCTACTCGCCGAATTCACCGCTCGGTGGGGCCCTGATCGACGCCAAGGTCGGCGAG
ACCCGCAGCTACACGGTGCCCAACGGCAGCACCGTGTCGGTGACCCTAGTCAGCGCCGAG
CCGTACCACTCCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv2710	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. JH. Lee, PC. Karakousis et al. Roles of SigB and SigF in the Mycobacterium tuberculosis sigma factor network. J. Bacteriol. 2008
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007