Rv1816 - transcriptional regulator

Expression: Most Significant Conditions for Rv1816

Protein Domains

Gene Information
Locus	Rv1816
Symbol
Gene Name	transcriptional regulator
Location	2058256 - 2058960 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:705 bp Protein:235 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	22439
Related Genes	MAP1528 MAV_2899 Mkms_2902 Mmcs_2858 MSMEG_3659 MT1864 Mvan_3167 nfa53260
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv1816
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv1816 Transcript 1
MCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSR
DELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSP
VPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFP
GDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH*

Genomic Sequence

>Rv1816
TTGTGTCAGACTTGCCGCGTGGGCAAACGCCGGGATGCGAGGGAACAGATCGAGGCGAAA
ATTGTCGAACTCGGCCGTCGCCAGCTGCTGGATCACGGCGCGGCCGGGTTGTCGCTTCGG
GCAATTGCCCGCAACCTGGGCATGGTGTCCTCGGCCGTATACCGCTATGTGTCCAGTCGT
GATGAGCTGTTGACTTTGCTGCTCGTCGACGCCTACTCCGACCTGGCCGATACCGTGGAC
CGAGCCCGCGACGACACCGTCGCCGACTCGTGGAGTGACGACGTCATCGCAATCGCTCGA
GCGGTGCGCGGTTGGGCAGTCACTAACCCCGCCCGCTGGGCCTTGCTATACGGTAGCCCG
GTTCCTGGTTATCACGCGCCGCCTGACCGTACCGCGGGCGTCGCCACCCGCGTGGTCGGA
GCGTTCTTCGACGCGATCGCCGCGGGAATCGCCACCGGAGACATCAGGTTAACCGATGAC
GTTGCGCCGCAGCCGATGTCATCGGACTTCGAAAAGATCCGGCAGGAGTTCGGCTTTCCC
GGCGACGATCGTGTCGTCACAAAGTGCTTTCTGCTCTGGGCGGGCGTGGTGGGCGCGATC
AGCCTGGAGGTATTCGGTCAGTACGGGGCCGACATGCTAACCGATCCAGGAGTGGTTTTC
GATGCCCAGACACGGCTGCTGGTGGCCGTGCTGGCCGAGCATTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv3414c	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) S. Raman, R. Hazra et al. Transcription regulation by the Mycobacterium tuberculosis alternative sigma factor SigD and its role in virulence. J. Bacteriol. 2004
Interaction	RegulatedBy Rv0757	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. SB. Walters, E. Dubnau et al. The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis. Mol. Microbiol. 2006