Rv1943c - conserved hypothetical protein

Expression: Most Significant Conditions for Rv1943c

Protein Domains

Gene Information
Locus	Rv1943c
Symbol
Gene Name	conserved hypothetical protein
Location	2194970 - 2195347 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:378 bp Protein:126 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	6983
Related Genes	MT1993
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv1943c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv1943c Transcript 1
MKTARLQVTLRCAVDLINSSSDQCFARIEHVASDQADPRPGVWHSSGMNRIRLSTTVDAA
LLTSARDMRAGITDAALIDEALAALLARHRSAEVDASYAAYDKHPVDEPDEWGDLASWRR
AAGDS*

Genomic Sequence

>Rv1943c
GTGAAGACGGCCCGGTTGCAGGTGACGTTGCGCTGCGCGGTAGACCTCATCAATTCGTCC
AGCGACCAATGTTTCGCCCGTATCGAGCACGTTGCGTCCGATCAGGCGGATCCACGCCCC
GGAGTGTGGCATAGTAGTGGCATGAATCGCATACGGCTGAGCACTACTGTCGACGCCGCA
CTCTTGACAAGTGCGCGCGACATGCGGGCAGGAATCACTGACGCAGCCCTCATCGATGAG
GCCCTTGCGGCATTACTGGCTCGTCATCGATCGGCCGAGGTGGATGCCAGCTATGCGGCC
TACGACAAGCACCCGGTCGATGAGCCCGACGAGTGGGGCGATCTAGCGTCGTGGCGGCGG
GCGGCTGGAGACTCGTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv1942c	active	shahanup86	2012-10-05
	Affinity purification (Physical interaction) authors,VL. Arcus,PB. Rainey,SJ. Turner The PIN-domain toxin-antitoxin array in mycobacteria. Trends Microbiol. 2005
Interaction	Regulatory Rv1942c	active	shahanup86	2012-10-05
	Affinity purification (Physical interaction) authors,HR. Ramage,LE. Connolly,JS. Cox Comprehensive functional analysis of Mycobacterium tuberculosis toxin-antitoxin systems: implications for pathogenesis, stress responses, and evolution. PLoS Genet. 2009
Interaction	Regulatory Rv1942c	active	shahanup86	2012-10-05
	Affinity purification (Physical interaction) authors,VL. Arcus,PB. Rainey,SJ. Turner The PIN-domain toxin-antitoxin array in mycobacteria. Trends Microbiol. 2005
Interaction	Regulatory Rv1942c	active	shahanup86	2012-10-05
	Affinity purification (Physical interaction) authors,HR. Ramage,LE. Connolly,JS. Cox Comprehensive functional analysis of Mycobacterium tuberculosis toxin-antitoxin systems: implications for pathogenesis, stress responses, and evolution. PLoS Genet. 2009
Interaction	RegulatedBy Rv1963c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. MP. Santangelo, FC. Blanco et al. Study of the role of Mce3R on the transcription of mce genes of Mycobacterium tuberculosis. BMC Microbiol. 2008