Rv2008c - conserved hypothetical protein

Expression: Most Significant Conditions for Rv2008c

Protein Domains

Gene Information
Locus	Rv2008c
Symbol
Gene Name	conserved hypothetical protein
Location	2256617 - 2257942 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1326 bp Protein:442 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	33339
Related Genes	MT2064
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv2008c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv2008c Transcript 1
MDEIESLIGLRPTPLTWPVVIAGDFLGVWDPPPSLPGAANHEISAPTARISCMLIERRDA
AARLRRALHRAPVVLLTGPRQAGKTTLSRLVGKSAPECTFDAENPVDATRLADPMLALSG
LSGLITIDEAQRIPDLFPVLRVLVDRPVMPARFLILGSASPDLVGLASESLAGRVELVEL
SGLTVRDVGSSAADRLWLRGGLPPSFTARSNEDSAAWRDGYITTFLERDLAQLGVRIPAA
TMRRAWTMLAHYHGQLFSGAELARSLDVAQTTARRYLDALTDALVVRQLTPWFANIGKRQ
RRSPKIYIRDTGLLHRLLGIDDRLALERNPKLGASWEGFVLEQLAALLAPNPLYYWRTQQ
DAELDLYVELSGRPYGFEIKRTSTPSISRSMRSALVDLQLARLAIVYPGEHRFPLSDTVV
AVPADQILTTGSVDELLALLK*

Genomic Sequence

>Rv2008c
ATGGACGAGATCGAGAGCCTTATCGGGCTGCGGCCAACCCCGCTGACCTGGCCGGTCGTT
ATCGCCGGCGACTTTCTAGGCGTGTGGGACCCACCACCGAGTCTCCCGGGGGCGGCTAAC
CATGAAATATCAGCGCCTACCGCTAGAATTTCATGCATGTTGATCGAACGCCGCGACGCC
GCCGCGCGGTTGCGACGCGCGCTACACCGAGCGCCGGTGGTGTTGCTTACCGGACCTCGT
CAAGCCGGCAAGACCACCCTTAGCCGGCTGGTGGGCAAGTCCGCACCCGAATGTACGTTT
GACGCCGAAAATCCCGTCGACGCGACACGGCTTGCCGACCCGATGTTGGCTTTATCCGGC
CTTAGCGGGTTGATCACGATCGACGAGGCGCAACGGATTCCGGATCTGTTTCCGGTCCTA
CGCGTGCTCGTCGACAGGCCTGTCATGCCGGCCCGGTTTCTTATCCTGGGTAGCGCCTCA
CCCGATCTTGTCGGGCTGGCGTCCGAAAGTTTGGCCGGACGCGTCGAGTTGGTGGAGTTG
TCCGGCCTGACGGTCCGCGACGTCGGATCCTCGGCCGCCGATCGCCTCTGGTTGCGTGGG
GGTCTACCGCCCTCGTTCACGGCACGCTCCAACGAGGACTCCGCGGCGTGGCGCGACGGC
TACATCACCACGTTTCTGGAGCGCGATCTCGCCCAGCTTGGTGTGCGCATTCCGGCCGCG
ACGATGCGGCGCGCGTGGACGATGCTCGCCCACTACCATGGCCAGCTCTTCAGCGGCGCA
GAACTTGCCCGCTCACTCGACGTTGCTCAGACGACGGCGCGGCGATACCTCGATGCGCTC
ACCGATGCACTCGTCGTCCGTCAGCTGACGCCCTGGTTCGCCAACATCGGAAAGCGACAA
CGCCGATCACCCAAGATCTACATCCGGGACACCGGTTTGTTGCACAGGTTGCTCGGTATC
GACGATCGGCTTGCCCTCGAACGCAATCCGAAGCTCGGCGCGAGCTGGGAGGGGTTCGTG
CTCGAGCAGCTTGCGGCCCTGCTCGCCCCGAATCCGCTGTATTACTGGCGCACCCAGCAA
GACGCCGAACTCGATCTCTATGTCGAATTATCTGGCCGTCCCTATGGATTCGAGATCAAG
CGGACGTCTACACCGTCGATTTCCCGGTCGATGCGCTCGGCTCTTGTCGACCTCCAACTG
GCGAGGTTGGCAATCGTCTACCCTGGCGAACACCGCTTTCCCTTGAGCGACACGGTCGTT
GCGGTTCCCGCGGATCAGATCTTGACCACCGGGAGTGTCGATGAACTTCTCGCGCTCTTG
AAATGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv3849	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. S. Raghavan, P. Manzanillo et al. Secreted transcription factor controls Mycobacterium tuberculosis virulence. Nature 2008