Rv2978c - transposase

Expression: Most Significant Conditions for Rv2978c

Protein Domains

Gene Information
Locus	Rv2978c
Symbol
Gene Name	transposase
Location	3333785 - 3335164 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1380 bp Protein:460 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	20068
Related Genes	MT3056
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv2978c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv2978c Transcript 1
MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV
TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK
RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA
GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI
EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT
RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV
ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA
AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA*

Genomic Sequence

>Rv2978c
ATGCCCAAGTTCGAGGTTCCCGATGGCTGGACGGTCCAAGCGTTTCGGTTCACGCTGGAC
CCGACCGAGGACCAGGCCAAGGCGCTGGCACGGCATTTCGGTGCTCGTCGCAAGGCATAC
AACTGGACCGTGGCCACCCTGAAAGCCGACATCCAGGCGTGGCATGCCAGCGGGACCGTG
ACAGCGAAACCGTCGCTGCGCGTGCTGCGCAAACGCTGGAACACCGTCAAGGACGACGTG
TGCGTCAACACCGAGACCGGTGTCGCGTGGTGGCCTGAATGCTCAAAAGAGGCCTACGCC
GATGGCATCGCGGGTGCGGTCGAGGCGTACTGGAACTGGCAGACCTCCCGCGCCGGCAAA
CGCGCCGGTAAACGGGTCGGGTTTCCCCGTTTCAAACGCAAAGGCCGCGACCAGGATCGA
GTGTCGTTCACGACCGGAGCGATGCGTGTGGAACCCGACCGCCGTCACCTCACCCTGCCG
GTCATCGGGACCGTCCGCACGCACGAGAACACCCGCCGTATCGAACGCCTGATCAAGGCC
GGTCGGGCGCGAGTATTGGCGATCTCGGTGCGCCGCAACGGCACTCGTCTGGATGCCAGT
GTGCGGGTGCTTGTCCAGCGTCCGCAGCAGCCGAAGGTGGTGCACCCCGGTTCGCGGGTT
GGTGTCGATGTCGGGGTCCGGCGCCTGGCGACGGTCGCCACCGCTGACGGCACGGCGATC
GAGCAGGTTGAGAACCCACGACCGCTCGGCGCCGCGCTGCGCGAGCTACGCCACGTGTGC
CGGGCCCGTTCGCGTTGCACGAAAGGTTCACGGCGCTACCGTGAGCGCACCACTCAGATT
TCCCGGTTGCATCGCCGGGTCAACGATGTCCGCACCCATCACCTGCACGTCCTGACGACA
CGGTTGGCTCAAACCCACGGCCGCATTGTTGTCGAAGGCTTGGACGCGACAGAGATGTTG
CGGCAAAAAGGGTTGCCGGGTGCCCGCGCTCGTCGGCGCGGACTGTCGGATGCGGCCCTG
GGCACTCCGCGTCGGCACTTGTCCTACAAGACAGTCTGGTACGGGTCGGCGCTGGTGGTC
GCCGACCGCTGGTTCCCGTCGTCGAAAACCTGCCACGCCTGCCGGCATGTGCAAGACATC
GGCTGGGACGAACAATGGCAATGCGACCGATGCTCAGTGGTCCATCAGCGTGATGACTGC
GCTGCCATCAACCTCGCACGCTACGAGGAAACATCCAGCATCGTCGGCCCAGTTGGGGCC
GCCGTCAAGCGTGGAGCCGACCGTAAGACCGGGCCTCGCCCGGCAGGTGGCTGTGAAGCG
CGGAAGGGAAGCAGCCCCAAGGCTGCCGAACAACCCCGAGACGGGGTGCAAGTCGCGTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv2710	active	ashwinigbhat	2012-10-05
	Co-expression (Functional linkage) JH. Lee, PC. Karakousis et al. Roles of SigB and SigF in the Mycobacterium tuberculosis sigma factor network. J. Bacteriol. 2008
Interaction	RegulatedBy Rv2710	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. JH. Lee, PC. Karakousis et al. Roles of SigB and SigF in the Mycobacterium tuberculosis sigma factor network. J. Bacteriol. 2008