Rv0479c - conserved membrane protein

Expression: Most Significant Conditions for Rv0479c

Protein Domains

Gene Information
Locus	Rv0479c
Symbol
Gene Name	conserved membrane protein
Location	567921 - 568967 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1047 bp Protein:349 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	14465
Related Genes	MAP3972c MAV_4671 Mkms_0660 ML2450 Mmcs_0647 MSMEG_0923 MT0497 MUL_4547 Mvan_0812 nfa52020
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv0479c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv0479c Transcript 1
MTNPQGPPNDPSPWARPGDQGPLARPPASSEASTGRLRPGEPAGHIQEPVSPPTQPEQQP
QTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVKTKRRARRDPLTVFLVLIIV
FSLVLAGLIGGELYARHVANSKVAQAVACVVKDQATASFGVAPLLLWQVATRHFTNISVE
TAGNQIRDAKGMQIKLTIQNVRLKNTPNSRGTIGALDATITWSSEGIKESVQNAIPILGA
FVTSSVVTHPADGTVELKGLLNNITAKPIVAGKGLELQIINFNTLGFSLPKETVQSTLNE
FTSSLTKNYPLGIHADSVQVTSTGVVSRFSTRDAAIPTGIQNPCFSHI*

Genomic Sequence

>Rv0479c
GTGACCAACCCGCAAGGTCCACCGAACGACCCGTCGCCCTGGGCGCGCCCTGGGGATCAA
GGTCCGCTCGCCCGACCCCCGGCATCGTCCGAAGCATCCACCGGTCGACTGCGCCCCGGC
GAGCCCGCGGGTCATATCCAAGAACCGGTGAGTCCGCCCACCCAACCGGAGCAGCAGCCG
CAAACTGAGCATCTGGCTGCGTCGCATGCCCACACACGGCGATCCGGCCGCCAAGCTGCG
CACCAGGCGTGGGACCCAACGGGCCTGCTGGCTGCGCAAGAGGAAGAGCCAGCGGCGGTG
AAGACCAAACGACGTGCCCGCCGCGACCCGCTAACCGTCTTTCTTGTCCTGATCATCGTG
TTTTCGCTCGTCCTCGCCGGGCTGATCGGAGGCGAGCTATACGCTCGCCATGTTGCCAAT
AGCAAGGTCGCCCAAGCGGTCGCATGCGTGGTCAAAGACCAAGCCACCGCATCCTTCGGT
GTGGCGCCGCTGCTGCTGTGGCAGGTCGCTACGCGGCACTTCACCAATATCTCGGTGGAA
ACCGCGGGCAATCAGATCCGCGATGCCAAGGGCATGCAGATAAAGCTCACGATCCAGAAC
GTCCGGCTCAAGAACACCCCCAACTCTAGGGGCACGATCGGCGCCCTGGACGCCACCATT
ACCTGGTCGTCGGAAGGCATCAAGGAATCGGTGCAAAACGCGATTCCGATCCTGGGCGCT
TTCGTCACCAGCAGCGTGGTCACTCACCCCGCAGACGGCACCGTCGAACTGAAGGGCCTG
CTGAACAACATCACAGCCAAGCCGATAGTGGCTGGCAAAGGATTGGAGCTGCAGATCATC
AATTTCAACACGCTCGGGTTCTCGCTGCCGAAAGAAACCGTTCAGTCGACGCTGAACGAG
TTCACCTCCAGCCTGACCAAGAACTACCCGTTGGGGATTCACGCGGACAGCGTGCAAGTC
ACCTCGACCGGCGTGGTGAGCCGGTTCTCAACTCGCGACGCGGCTATCCCCACCGGCATC
CAGAATCCCTGCTTCTCGCACATTTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Transcription Rv1221	active	sourish10	2012-10-05
	Co-expression (Functional linkage) PA. Fontán, V. Aris et al. Mycobacterium tuberculosis Sigma Factor E Regulon Modulates the Host Inflammatory Response. J. Infect. Dis. 2008
Interaction	Transcription Rv3911	active	sourish10	2012-10-05
	Co-expression (Functional linkage) PA. Fontán, V. Aris et al. Mycobacterium tuberculosis Sigma Factor E Regulon Modulates the Host Inflammatory Response. J. Infect. Dis. 2008
Interaction	Transcription Rv1221	active	sourish10	2012-10-05
	Co-expression (Functional linkage) N. Agarwal, SC. Woolwine et al. Characterization of the Mycobacterium tuberculosis sigma factor SigM by assessment of virulence and identification of SigM-dependent genes. Infect. Immun. 2007
Interaction	Transcription Rv3911	active	sourish10	2012-10-05
	Co-expression (Functional linkage) N. Agarwal, SC. Woolwine et al. Characterization of the Mycobacterium tuberculosis sigma factor SigM by assessment of virulence and identification of SigM-dependent genes. Infect. Immun. 2007
Interaction	RegulatedBy Rv1221	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. PA. Fontán, V. Aris et al. Mycobacterium tuberculosis Sigma Factor E Regulon Modulates the Host Inflammatory Response. J. Infect. Dis. 2008
Interaction	RegulatedBy Rv3911	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. N. Agarwal, SC. Woolwine et al. Characterization of the Mycobacterium tuberculosis sigma factor SigM by assessment of virulence and identification of SigM-dependent genes. Infect. Immun. 2007