Rv0884c - phosphoserine aminotransferase serC

Expression: Most Significant Conditions for Rv0884c

Protein Domains

Gene Information
Locus	Rv0884c
Symbol	serC
Gene Name	phosphoserine aminotransferase serC
Location	981424 - 982554 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1131 bp Protein:377 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	377
Related Genes	Acel_0114 BL1660 CE0903 cg0948 DIP0784 jk0425 MAP0823c MAV_1012 Mkms_4551 ML2136 Mmcs_4464 MSMEG_5684 MT0907 MUL_0266 Mvan_5033 nfa6550 PPA0483 SAV3883
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv0884c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv0884c Transcript 1
MADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGR
VRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKRSLHLTYGEFSAKFASAVSKNP
FVGEPIIITSDPGSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSG
AGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIA
VENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTP
FVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPD
DVSALTECVDWVVERL*

Genomic Sequence

>Rv0884c
ATGGCCGACCAGCTCACCCCCCACCTGGAAATTCCCACCGCCATCAAACCCCGCGACGGC
CGCTTTGGGTCGGGCCCGTCGAAGGTCCGGCTTGAGCAACTGCAAACGCTGACCACCACC
GCAGCGGCATTGTTCGGCACGTCGCACCGACAGGCGCCGGTCAAGAATCTGGTGGGCAGG
GTTCGGTCAGGCCTGGCCGAGCTGTTCTCGTTGCCGGACGGCTATGAGGTGATACTGGGC
AATGGTGGTGCCACGGCGTTCTGGGATGCGGCCGCCTTCGGGCTGATTGACAAACGCTCA
CTGCACTTGACTTACGGCGAGTTCAGCGCGAAGTTCGCTTCCGCCGTTTCCAAGAACCCG
TTCGTCGGCGAGCCGATCATCATCACGTCGGATCCCGGCAGTGCTCCGGAGCCGCAAACC
GACCCGTCAGTCGATGTGATCGCCTGGGCCCACAACGAGACCTCGACCGGGGTCGCGGTT
GCGGTGCGCCGTCCGGAGGGCTCCGATGACGCCTTGGTCGTCATCGACGCCACCTCCGGT
GCTGGCGGCCTACCGGTCGACATCGCCGAGACCGACGCCTACTACTTCGCACCGCAGAAG
AACTTCGCCAGCGACGGCGGCCTGTGGCTGGCCATCATGAGCCCGGCCGCCCTGAGCCGG
ATCGAGGCCATCGCCGCGACCGGTCGCTGGGTTCCTGATTTCCTGTCCCTGCCGATCGCG
GTCGAGAACAGCTTGAAGAACCAGACATACAACACACCGGCCATCGCCACGCTGGCGCTG
CTGGCCGAACAGATCGACTGGCTGGTGGGTAACGGTGGCTTGGACTGGGCGGTCAAACGC
ACCGCGGACTCGTCGCAGCGGTTGTACTCGTGGGCGCAAGAGCGGCCCTACACCACGCCA
TTTGTCACCGACCCCGGGTTGCGGTCGCAGGTGGTGGGCACGATCGACTTCGTCGACGAC
GTCGACGCCGGGACCGTCGCGAAGATCCTGCGGGCTAACGGCATCGTCGACACCGAGCCG
TATCGCAAACTGGGCCGAAACCAGCTGCGGGTCGCGATGTTCCCCGCGGTCGAGCCGGAC
GACGTCAGCGCCCTCACCGAGTGCGTCGACTGGGTGGTCGAGCGGCTTTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Transcription Rv3676	active	jgalag	2012-10-05
	Band shift M. Stapleton, I. Haq et al. Mycobacterium tuberculosis cAMP receptor protein (Rv3676) differs from the Escherichia coli paradigm in its cAMP binding and DNA binding properties and transcription activation properties. J. Biol. Chem. 2010
Interaction	Transcription Rv3676	active	jgalag	2012-10-05
	Band shift G. Bai, LA. McCue et al. Characterization of Mycobacterium tuberculosis Rv3676 (CRPMt), a cyclic AMP receptor protein-like DNA binding protein. J. Bacteriol. 2005
Interaction	RegulatedBy Rv3676	active	yamir.moreno	2012-10-05
	Literature previously reported link (from Balazsi et al. 2008). Traceable author statement to experimental support. G. Balázsi, AP. Heath et al. The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. Mol. Syst. Biol. 2008
Interaction	RegulatedBy Rv3291c	active	yamir.moreno	2012-10-05
	E.coli orthology based inference. Orthologous pair regulator-target found in E.coli. G. Balázsi, AP. Heath et al. The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. Mol. Syst. Biol. 2008
Interaction	RegulatedBy Rv3291c	active	yamir.moreno	2012-10-05
	E.coli orthology based inference. Orthologous pair regulator-target found in E.coli. authors,M. Madan Babu,SA. Teichmann,L. Aravind Evolutionary dynamics of prokaryotic transcriptional regulatory networks. J. Mol. Biol. 2006