Rv1047 - transposase

Expression: Most Significant Conditions for Rv1047

Protein Domains

Gene Information
Locus	Rv1047
Symbol
Gene Name	transposase
Location	1169423 - 1170670 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1248 bp Protein:416 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	30466
Related Genes	Acel_1162 MT1076 MT2587 nfa10170 Rv2512c SAV6894 SAV6900
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv1047
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv1047 Transcript 1
MTSSHLIDAEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQR
NGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRM
ERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVV
GVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA
AIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDA
LTDKLPAVAEHLDTARTDLLAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRA
SIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT*

Genomic Sequence

>Rv1047
ATGACCTCTTCTCATCTTATCGACGCCGAGCAGCTTCTGGCTGACCAACTCGCACAGGCG
AGCCCGGATCTGCTGCGCGGGCTGCTCTCGACGTTCATCGCCGCCTTGATGGGGGCTGAA
GCCGACGCCCTGTGCGGGGCGGGCTACCGCGAACGCAGCGATGAGCGGTCCAATCAGCGC
AACGGCTACCGCCACCGTGATTTCGACACCCGTGCCGCAACCATCGACGTCGCGATCCCC
AAGCTGCGCCAGGGCAGCTATTTCCCGGACTGGCTGCTGCAGCGCCGCAAGCGAGCTGAA
CGCGCACTGACCAGCGTGGTGGCGACCTGCTACCTGCTGGGAGTATCCACTCGCCGGATG
GAGCGCCTGGTCGAAACACTTGGTGTGACAAAGCTTTCCAAGTCGCAAGTGTCGATCATG
GCCAAAGAGCTCGACGAAGCCGTAGAGGCGTTTCGGACCCGCCCGCTCGATGCCGGCCCG
TATACCTTCCTCGCCGCCGACGCCCTGGTGCTCAAGGTGCGCGAGGCAGGCCGCGTCGTC
GGGGTGCACACCTTGATCGCCACCGGCGTCAACGCCGAGGGCTACCGAGAGATCCTGGGC
ATCCAGGTCACCTCCGCCGAGGACGGGGCCGGCTGGCTGGCGTTCTTCCGCGACCTGGTC
GCCCGCGGCCTGTCCGGGGTCGCGCTGGTCACCAGCGACGCCCACGCCGGCCTGGTGGCC
GCGATCGGCGCCACCCTGCCCGCAGCGGCCTGGCAGCGCTGCAGAACCCACTACGCAGCC
AATCTGATGGCAGCCACCCCGAAGCCCTCCTGGCCGTGGGTGCGCACCCTGCTGCACTCC
ATCTACGACCAGCCCGACGCCGAATCAGTTGTTGCCCAATATGATCGGGTACTCGACGCT
CTGACCGACAAACTCCCCGCGGTGGCCGAGCACCTCGACACCGCCCGCACCGACCTGCTG
GCGTTCACCGCCTTCCCCAAGCAGATCTGGCGCCAAATCTGGTCCAACAACCCCCAGGAA
CGCCTCAACCGAGAGGTACGACGCCGAACCGACGTCGTGGGCATCTTCCCCGACCGCGCC
TCGATCATCCGCCTCGTCGGAGCCGTCCTCGCCGAACAACACGACGAATGGATCGAAGGA
CGGCGCTACCTGGGCCTCGAGGTCCTCACCCGAGCCCGAGCAGCACTGACCAGCACCGAA
GAACCCGCCAAGCAGCAAACCACCAACACCCCAGCACTGACCACCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv0485	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. qRT-PCR. mRNA expression levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using qRT-PCR technique. RM. Goldstone, SD. Goonesekera et al. The transcriptional regulator Rv0485 modulates the expression of a pe and ppe gene pair and is required for Mycobacterium tuberculosis virulence. Infect. Immun. 2009
Interaction	RegulatedBy Rv0485	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. qRT-PCR. mRNA expression levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using qRT-PCR technique. RM. Goldstone, SD. Goonesekera et al. The transcriptional regulator Rv0485 modulates the expression of a pe and ppe gene pair and is required for Mycobacterium tuberculosis virulence. Infect. Immun. 2009