Rv1235 - sugar-binding lipoprotein lpqY

Expression: Most Significant Conditions for Rv1235

Protein Domains

Gene Information
Locus	Rv1235
Symbol	lpqY
Gene Name	sugar-binding lipoprotein lpqY
Location	1377524 - 1378930 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1407 bp Protein:469 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	35259
Related Genes	CE0870 DIP0534 MAP2548c MAV_1374 Mkms_4057 ML1086 Mmcs_3983 MSMEG_5061 MT1273 Mvan_2544 PPA0398
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv1235
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv1235 Transcript 1
MVMSRGRIPRLGAAVLVALTTAAAACGADSQGLVVSFYTPATDGATFTAIAQRCNQQFGG
RFTIAQVSLPRSPNEQRLQLARRLTGNDRTLDVMALDVVWTAEFAEAGWALPLSDDPAGL
AENDAVADTLPGPLATAGWNHKLYAAPVTTNTQLLWYRPDLVNSPPTDWNAMIAEAARLH
AAGEPSWIAVQANQGEGLVVWFNTLLVSAGGSVLSEDGRHVTLTDTPAHRAATVSALQIL
KSVATTPGADPSITRTEEGSARLAFEQGKAALEVNWPFVFASMLENAVKGGVPFLPLNRI
PQLAGSINDIGTFTPSDEQFRIAYDASQQVFGFAPYPAVAPGQPAKVTIGGLNLAVAKTT
RHRAEAFEAVRCLRDQHNQRYVSLEGGLPAVRASLYSDPQFQAKYPMHAIIRQQLTDAAV
RPATPVYQALSIRLAAVLSPITEIDPESTADELAAQAQKAIDGMGLLP*

Genomic Sequence

>Rv1235
GTGGTCATGAGTCGCGGGCGGATACCGAGGCTGGGCGCTGCCGTACTGGTGGCGTTGACG
ACCGCGGCGGCGGCGTGCGGGGCCGATAGCCAGGGGCTGGTGGTCAGCTTCTACACACCG
GCCACCGACGGCGCGACGTTCACCGCAATTGCCCAACGCTGCAACCAACAGTTCGGCGGC
CGGTTCACCATTGCGCAGGTCAGCTTGCCCAGGTCCCCCAATGAGCAACGGTTACAGCTG
GCCCGACGGTTGACCGGTAACGACCGCACCCTGGACGTCATGGCGCTGGATGTGGTGTGG
ACGGCGGAGTTCGCCGAAGCGGGGTGGGCGCTGCCGCTGTCGGACGACCCAGCGGGGCTG
GCCGAGAACGACGCCGTCGCCGATACCCTGCCAGGCCCGCTTGCGACGGCCGGCTGGAAC
CACAAGCTGTACGCGGCACCCGTCACCACTAATACTCAATTGCTTTGGTACCGACCAGAT
TTGGTAAATAGCCCGCCAACGGATTGGAATGCCATGATCGCTGAGGCGGCCCGGCTGCAC
GCGGCGGGCGAGCCTAGCTGGATCGCGGTACAGGCCAATCAGGGCGAGGGCTTAGTGGTG
TGGTTCAACACGCTGCTGGTGAGCGCTGGTGGATCGGTGCTCTCCGAGGACGGCCGGCAC
GTCACCTTGACCGATACTCCCGCACACCGAGCGGCTACGGTCAGCGCGCTACAGATCCTC
AAATCGGTGGCTACCACGCCCGGCGCCGACCCCTCGATCACCCGCACCGAAGAGGGCAGC
GCGCGGTTGGCCTTCGAACAGGGCAAGGCCGCGCTCGAGGTCAATTGGCCGTTCGTGTTT
GCGTCCATGCTCGAGAACGCGGTGAAGGGTGGTGTGCCCTTCTTACCGCTTAACCGGATT
CCGCAGTTGGCCGGCAGCATCAACGACATCGGGACGTTCACGCCCAGCGACGAGCAGTTC
CGCATCGCGTATGACGCCAGCCAGCAGGTGTTCGGTTTCGCGCCCTATCCGGCTGTAGCG
CCCGGCCAGCCAGCCAAGGTGACGATCGGCGGGTTGAACCTGGCGGTGGCCAAGACGACC
CGCCATCGAGCGGAGGCATTCGAAGCGGTGCGTTGTCTGCGTGACCAGCACAATCAGAGG
TACGTCTCGCTCGAGGGGGGTCTGCCCGCGGTGCGGGCGTCGCTGTACTCCGATCCGCAA
TTCCAGGCGAAGTATCCGATGCACGCCATTATTCGGCAGCAACTCACCGATGCCGCGGTG
CGGCCGGCGACGCCGGTGTACCAGGCGTTGTCCATCCGGCTCGCGGCGGTGCTGAGCCCG
ATCACCGAGATCGACCCGGAGTCCACGGCCGACGAACTTGCCGCGCAGGCGCAGAAAGCC
ATCGACGGCATGGGCCTGCTCCCGTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Operon Rv1238	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,J. Rengarajan,BR. Bloom,EJ. Rubin Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages. Proc. Natl. Acad. Sci. U.S.A. 2005
Interaction	Operon Rv1238	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,CM. Sassetti,EJ. Rubin Genetic requirements for mycobacterial survival during infection. Proc. Natl. Acad. Sci. U.S.A. 2003
Interaction	Operon Rv1237	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,J. Rengarajan,BR. Bloom,EJ. Rubin Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages. Proc. Natl. Acad. Sci. U.S.A. 2005
Interaction	Operon Rv1237	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,CM. Sassetti,EJ. Rubin Genetic requirements for mycobacterial survival during infection. Proc. Natl. Acad. Sci. U.S.A. 2003
Interaction	Operon Rv1236	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,J. Rengarajan,BR. Bloom,EJ. Rubin Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages. Proc. Natl. Acad. Sci. U.S.A. 2005
Interaction	Operon Rv1236	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,CM. Sassetti,EJ. Rubin Genetic requirements for mycobacterial survival during infection. Proc. Natl. Acad. Sci. U.S.A. 2003
Interaction	Operon Rv1238	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,J. Rengarajan,BR. Bloom,EJ. Rubin Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages. Proc. Natl. Acad. Sci. U.S.A. 2005
Interaction	Operon Rv1237	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,J. Rengarajan,BR. Bloom,EJ. Rubin Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages. Proc. Natl. Acad. Sci. U.S.A. 2005
Interaction	Operon Rv1236	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,J. Rengarajan,BR. Bloom,EJ. Rubin Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages. Proc. Natl. Acad. Sci. U.S.A. 2005
Interaction	Operon Rv1238	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,CM. Sassetti,EJ. Rubin Genetic requirements for mycobacterial survival during infection. Proc. Natl. Acad. Sci. U.S.A. 2003
Interaction	Operon Rv1237	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,CM. Sassetti,EJ. Rubin Genetic requirements for mycobacterial survival during infection. Proc. Natl. Acad. Sci. U.S.A. 2003
Interaction	Operon Rv1236	active	harsharohiratruefriend	2012-10-05
	Gene-Neighborhood authors,CM. Sassetti,EJ. Rubin Genetic requirements for mycobacterial survival during infection. Proc. Natl. Acad. Sci. U.S.A. 2003
Interaction	RegulatedBy Rv3676	active	yamir.moreno	2012-10-05
	E.coli orthology based inference. Orthologous pair regulator-target found in E.coli. G. Balázsi, AP. Heath et al. The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. Mol. Syst. Biol. 2008
Interaction	RegulatedBy Rv3080c	active	yamir.moreno	2012-10-05
	E.coli orthology based inference. Orthologous pair regulator-target found in E.coli. G. Balázsi, AP. Heath et al. The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. Mol. Syst. Biol. 2008
Interaction	RegulatedBy Rv3676	active	yamir.moreno	2012-10-05
	E.coli orthology based inference. Orthologous pair regulator-target found in E.coli. authors,M. Madan Babu,SA. Teichmann,L. Aravind Evolutionary dynamics of prokaryotic transcriptional regulatory networks. J. Mol. Biol. 2006
Interaction	RegulatedBy Rv3080c	active	yamir.moreno	2012-10-05
	E.coli orthology based inference. Orthologous pair regulator-target found in E.coli. authors,M. Madan Babu,SA. Teichmann,L. Aravind Evolutionary dynamics of prokaryotic transcriptional regulatory networks. J. Mol. Biol. 2006