Rv1823 - conserved hypothetical protein

Expression: Most Significant Conditions for Rv1823

Protein Domains

Gene Information
Locus	Rv1823
Symbol
Gene Name	conserved hypothetical protein
Location	2069702 - 2070625 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:924 bp Protein:308 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	32659
Related Genes	Acel_1228 Acel_1230 BL0748 BL0749 MAP1536 MAP1538 MAV_2890 MAV_2892 Mkms_2890 Mkms_2892 Mmcs_2846 Mmcs_2848 MSMEG_3649 MSMEG_3651 MT1871 MT1873 MUL_3042 MUL_3044 Mvan_3137 Mvan_3139 PPA1080 PPA1082 Rv1825 SAV6978 SAV6980
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv1823
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv1823 Transcript 1
MAESDRLLGGYDPNAGYSAHAGAQPQRIPVPSLLRALLSEHLDAGYAAVAAERERAAAPR
CWQARAVSWMWQALAATLVAAVFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQ
RRSTLSAKVDDVRRIVLADDAEGQRLLARLDVLSLAAASAPVVGPGLTVTVTDPGASPNL
SDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVTIRQAGGAILVDNN
PTSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSYGVGVSVNVGDGLALPAGATRDVK
FAKQIGP*

Genomic Sequence

>Rv1823
GTGGCTGAGTCTGACCGGCTGCTCGGCGGCTACGACCCCAACGCCGGCTACAGCGCCCAC
GCAGGGGCGCAGCCACAACGCATCCCGGTTCCGTCGTTGCTGCGCGCGCTGCTATCAGAG
CATCTGGATGCTGGATACGCGGCGGTTGCCGCCGAGCGCGAGCGTGCTGCGGCACCACGG
TGTTGGCAAGCCCGCGCCGTCAGCTGGATGTGGCAGGCATTGGCCGCGACCCTAGTCGCC
GCCGTGTTCGCTGCCGCGGTAGCGCAGGCGCGCTCGGTGGCACCCGGCGTGCGCGCCGCC
CAACAGTTGCTCGTTGCGAGTGTGCGATCAACCCAGGCCGCCGCGACCACGTTGGCTCAA
CGGCGCAGCACACTCTCGGCGAAAGTCGACGACGTGCGGCGGATCGTACTCGCAGACGAC
GCCGAGGGACAGCGGCTGCTGGCCCGTCTCGACGTGCTTAGCCTGGCCGCGGCCAGCGCA
CCGGTTGTCGGGCCTGGTCTGACGGTGACCGTGACCGATCCCGGTGCGAGCCCTAATCTT
TCCGACGTGTCCAAGCAGCGGGTCAGCGGTAGCCAGCAAATCATCCTCGACCGCGATTTG
CAGCTCGTCGTCAACTCACTGTGGGAAAGTGGCGCCGAGGCCATCTCGATCGATGGCGTC
CGGATCGGGCCGAACGTCACGATCCGGCAAGCCGGCGGAGCAATCTTGGTCGACAATAAT
CCCACGAGTAGTCCCTACACCATCTTGGCGGTCGGGCCGCCACATGCCATGCAGGACGTC
TTCGATCGCAGCGCCGGGCTGTACCGCCTGCGGCTGCTGGAGACCTCCTACGGTGTCGGC
GTCAGTGTGAACGTCGGCGACGGTCTGGCATTGCCTGCCGGTGCGACCCGGGATGTCAAG
TTCGCCAAACAGATTGGGCCCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Transcription Rv1826	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) D. Homerova,K. Surdova,K. Mikusova,J. Kormanec Identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress-response sigma factor sigma(F). Arch. Microbiol. 2007
Interaction	Transcription Rv1826	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	Transcription Rv1825	active	sourish10	2012-10-05
	Co-expression (Functional linkage) D. Homerova,K. Surdova,K. Mikusova,J. Kormanec Identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress-response sigma factor sigma(F). Arch. Microbiol. 2007
Interaction	Transcription Rv1825	active	sourish10	2012-10-05
	Co-expression (Functional linkage) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	Transcription Rv1824	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) D. Homerova,K. Surdova,K. Mikusova,J. Kormanec Identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress-response sigma factor sigma(F). Arch. Microbiol. 2007
Interaction	Transcription Rv1824	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	Transcription Rv1824	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) D. Homerova,K. Surdova,K. Mikusova,J. Kormanec Identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress-response sigma factor sigma(F). Arch. Microbiol. 2007
Interaction	Transcription Rv1826	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) D. Homerova,K. Surdova,K. Mikusova,J. Kormanec Identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress-response sigma factor sigma(F). Arch. Microbiol. 2007
Interaction	Transcription Rv1825	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) D. Homerova,K. Surdova,K. Mikusova,J. Kormanec Identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress-response sigma factor sigma(F). Arch. Microbiol. 2007
Interaction	Transcription Rv1824	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	Transcription Rv1826	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	Transcription Rv1825	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	Transcription Rv3286c	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) D. Homerova,K. Surdova,K. Mikusova,J. Kormanec Identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress-response sigma factor sigma(F). Arch. Microbiol. 2007
Interaction	Transcription Rv3286c	active	madhulsbu	2012-10-05
	Co-expression (Functional linkage) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. qRT-PCR. mRNA expression levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using qRT-PCR technique. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. qRT-PCR. mRNA expression levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using qRT-PCR technique. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007