Rv2052c - conserved hypothetical protein

Expression: Most Significant Conditions for Rv2052c

Protein Domains

Gene Information
Locus	Rv2052c
Symbol
Gene Name	conserved hypothetical protein
Location	2310913 - 2312517 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1605 bp Protein:535 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	34620
Related Genes	MAP1801c MAV_2445 Mkms_2546 Mmcs_2501 MSMEG_3861 MT2112 MUL_2270 Mvan_3420 nfa31190 SAV6922
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv2052c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv2052c Transcript 1
MSQIPVKLLVNGRVYSPTHPEATAMAVRGDVVAWLGSDDVGRDQFPDADVQDLDGRFVAP
GFVDSHIHLTATGLMLSGLDLRPATSRAQCLRMVADYAADHPGQPLWGHGWDESAWPENA
APSTADLDAVLGDCPAYLARIDSHSALVSSGLRRLVPELAAATGYTAQRPLTGDAHHLAR
AAARYLLTDVQLADARAVALQAIAAAGVVAVHECAGPEIGGLDDWLRLRALEHGVEVIGY
WGEAVATPAQARDLVTETGARGLAGDLFVDGALGSRTAWLHEPYADAPDCIGTCHLDVDG
IEAHVRACTKAEVTAGFHVIGDAAVSAAVAAFERVVADLGVVAVARCGHRLEHVEMVTAD
QAAKLGAWGVIASVQPNFDELWGGGDGMYARRLGAQRGSELNPLALLASQGVPLALGSDA
PVTGFDPWASVRAAVNHRTPGSGVSARAAFAAATRGGWRAGGVRDGRIGTLVPGAPASYA
IWDAGDFDVDAPRDAVQRWSTDPRSRVPALPRLGPTDALPRCRQTVHRGAVIYG*

Genomic Sequence

>Rv2052c
GTGAGCCAGATTCCCGTCAAACTCCTGGTCAACGGCCGGGTGTACAGCCCCACCCACCCC
GAAGCCACCGCGATGGCGGTGCGCGGCGATGTCGTCGCCTGGTTGGGCAGCGACGACGTC
GGCCGCGACCAGTTCCCAGACGCTGACGTGCAGGATCTCGACGGCCGATTCGTGGCGCCG
GGGTTCGTGGACAGCCACATCCACCTGACCGCGACCGGTCTGATGCTCAGCGGGCTGGAC
TTGCGGCCCGCGACCTCACGCGCGCAGTGCCTACGGATGGTCGCCGACTATGCGGCCGAC
CATCCGGGTCAGCCGCTGTGGGGTCACGGTTGGGATGAGTCGGCCTGGCCGGAGAATGCT
GCGCCCAGCACCGCCGACCTAGACGCGGTTCTCGGTGACTGTCCCGCCTACCTGGCCAGG
ATCGACTCGCACTCCGCGTTGGTCTCCTCCGGACTGCGGCGGCTGGTCCCCGAGCTGGCG
GCGGCAACCGGTTACACGGCCCAGCGGCCGCTGACCGGTGATGCCCACCACCTAGCCCGG
GCCGCCGCACGCTACCTCTTGACCGACGTCCAGCTTGCCGACGCCCGGGCCGTGGCGCTG
CAGGCCATAGCCGCGGCCGGCGTCGTCGCCGTGCACGAATGCGCCGGTCCGGAAATCGGC
GGGCTCGACGACTGGTTGCGGCTGCGTGCACTCGAGCACGGAGTCGAGGTGATCGGGTAC
TGGGGTGAGGCCGTGGCCACGCCGGCCCAGGCCCGTGACCTGGTGACCGAGACCGGGGCT
CGAGGGCTGGCCGGTGATTTGTTCGTCGACGGGGCGCTCGGGTCGCGCACCGCCTGGCTG
CACGAGCCCTACGCGGACGCCCCCGACTGCATCGGCACCTGCCACCTTGACGTAGACGGC
ATCGAAGCGCACGTACGAGCATGCACCAAGGCCGAAGTGACCGCCGGCTTCCACGTCATC
GGCGACGCTGCGGTGTCGGCCGCAGTCGCCGCCTTCGAACGGGTGGTGGCAGATCTCGGC
GTGGTTGCCGTCGCCCGCTGCGGCCACCGCCTCGAGCATGTGGAGATGGTCACCGCGGAC
CAGGCCGCGAAGCTGGGCGCTTGGGGGGTCATCGCCAGTGTGCAGCCCAACTTCGATGAG
CTGTGGGGCGGTGGCGACGGCATGTACGCTCGCCGCCTGGGCGCCCAGCGAGGCAGCGAA
CTCAACCCGCTGGCGCTGTTAGCATCCCAAGGCGTGCCCCTCGCGCTTGGCTCCGACGCG
CCCGTCACGGGCTTTGATCCCTGGGCCAGCGTGCGCGCGGCGGTCAATCACCGCACGCCG
GGCAGCGGGGTATCGGCGCGGGCGGCGTTTGCTGCCGCGACCCGCGGCGGCTGGCGGGCC
GGTGGTGTTCGAGACGGCCGGATCGGCACCCTGGTGCCGGGCGCGCCCGCGTCCTACGCG
ATATGGGACGCCGGGGACTTTGACGTCGACGCACCGCGCGACGCAGTCCAGCGCTGGTCT
ACCGACCCGCGCTCCCGGGTACCCGCATTGCCGCGGCTGGGCCCGACCGACGCCTTGCCG
CGTTGCCGCCAAACCGTGCATCGAGGTGCGGTCATCTATGGCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv2866	active	shahanup86	2012-10-05
	Co-expression (Functional linkage) authors,R. Singh,CE. Barry,HI. Boshoff The three RelE homologs of Mycobacterium tuberculosis have individual, drug-specific effects on bacterial antibiotic tolerance. J. Bacteriol. 2010
Interaction	Regulatory Rv1246c	active	shahanup86	2012-10-05
	Co-expression (Functional linkage) authors,R. Singh,CE. Barry,HI. Boshoff The three RelE homologs of Mycobacterium tuberculosis have individual, drug-specific effects on bacterial antibiotic tolerance. J. Bacteriol. 2010
Interaction	PhysicalInteraction Rv2053c	active	shahanup86	2012-10-05
	Operon (Functional linkage) authors,R. Singh,CE. Barry,HI. Boshoff The three RelE homologs of Mycobacterium tuberculosis have individual, drug-specific effects on bacterial antibiotic tolerance. J. Bacteriol. 2010
Interaction	RegulatedBy Rv1221	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. R. Manganelli, MI. Voskuil et al. The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages. Mol. Microbiol. 2001