Rv2162c - PE-PGRS family protein

Expression: Most Significant Conditions for Rv2162c

Protein Domains

Gene Information
Locus	Rv2162c
Symbol	PE_PGRS38
Gene Name	PE-PGRS family protein
Location	2423240 - 2424838 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1599 bp Protein:533 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	26632
Related Genes	CE2060 cg2376 DIP1605 jk0743 MAP1904c MAV_2329 Mkms_3325 ML0907 Mmcs_3263 MSMEG_4234 MT2220 MT2222 MUL_3507 MUL_3509 Mvan_3530 nfa17590 Rv2164c
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv2162c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv2162c Transcript 1
MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ
GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA
DGGPGQNGGPGGLLYGNGGNGGAGDTANPNGGNGGSAGLIGNGGAGGAGAATGAGGAGGN
GGWLYGNGGPGGAAGLGTAGGVSPAGGAGGAAGLWGHGGAGGAGGSASGAPGAGGAGGDG
GRGGLLYGDGGAGGAGGNGSNGVTGVHGGNGGAGGAAGLIGNGGAGGDGGNGGLSNTGAS
GGAGGAGGAALIGNGGDGGHGGNGGHGNSGGAGGAGGAGGAGGAGGHVGLIGNGGNGGAG
GNGGNDNSSTLADAGSGGAGAAGGNGGLFYGNGGVGGRGGNGGFSSAGTSGGDGGIGGAG
GIGGLIGSGGGGGDGGNGGQAPTPGNAGDGGAGGNARLIGDGGRGGNGGEGGDGPPGVKG
DGGNGGNGGNAVVIGNGGNGGAGGFGIPVGSGGAGGSRGVLFGTPGANGADG*

Genomic Sequence

>Rv2162c
ATGTCGTTTGTGATTGCGGCGCCGGAGGTGATGGCAGCGGCCGCCACGGATTTGGCGAAC
ATCGGGTCGTCGATCAGCGCCGCCAGTGCGGCGGCGGCAGGCCCCACGATGGGAATCCTG
GCGGCCGGCGCCGACGAGGTGTCGGTGGCGATCTCGGCGTTGTTCGGGTCGCACGCCCAG
GGCTATCAGACGTTGAGCGCTCAGCTGGCGGCGTATCACAACCAGTTCGTGCGGGCCCTG
AACGCCGGCGCGGGCTCGTATGCCAGCGCCGAGGCCGCCAACGTGCAGCAGACCCTGCTC
AACGCGATCAACGCGCCCACCCAAACGTTGCTGGGGCGCCCGTTGATCGGCAACGGCGCC
GACGGGGGTCCCGGGCAAAACGGTGGGCCCGGCGGCTTGTTGTACGGCAACGGTGGTAAC
GGCGGGGCCGGTGACACCGCCAATCCCAACGGCGGCAACGGCGGATCGGCGGGGCTGATC
GGCAACGGCGGGGCCGGAGGCGCGGGTGCGGCCACCGGAGCGGGAGGTGCGGGCGGCAAT
GGCGGATGGCTGTACGGCAACGGGGGGCCCGGGGGTGCGGCCGGGCTCGGCACCGCCGGG
GGCGTCAGCCCCGCCGGCGGGGCCGGCGGGGCCGCCGGGCTGTGGGGCCATGGCGGGGCC
GGCGGGGCCGGCGGCAGCGCATCCGGGGCACCGGGGGCCGGCGGCGCCGGTGGTGACGGA
GGGCGCGGCGGGCTGCTGTACGGCGACGGCGGGGCCGGCGGGGCTGGTGGGAACGGAAGC
AACGGGGTGACCGGGGTGCACGGCGGAAACGGCGGTGCCGGCGGCGCCGCCGGGCTGATC
GGCAACGGTGGCGCCGGCGGTGACGGCGGTAACGGCGGGCTCAGCAACACCGGCGCCAGC
GGTGGGGCGGGTGGTGCCGGCGGGGCCGCCCTGATCGGTAATGGCGGCGACGGGGGGCAC
GGCGGCAACGGTGGCCACGGCAACAGCGGTGGGGCCGGCGGCGCCGGTGGGGCCGGTGGG
GCCGGTGGGGCCGGTGGGCACGTCGGGCTGATCGGCAACGGCGGCAACGGCGGTGCCGGC
GGCAACGGGGGCAACGACAACAGCTCCACCCTTGCCGATGCGGGGTCCGGCGGCGCCGGC
GCGGCCGGCGGCAACGGCGGGCTGTTCTACGGCAACGGCGGCGTCGGCGGGCGCGGCGGC
AACGGCGGCTTCTCGTCGGCCGGCACCAGCGGCGGGGACGGCGGCATCGGCGGTGCCGGC
GGGATCGGCGGGCTGATCGGCAGCGGCGGCGGCGGCGGGGACGGCGGCAACGGCGGACAG
GCTCCCACGCCGGGTAATGCCGGTGACGGCGGCGCCGGCGGCAACGCCAGGCTGATCGGT
GACGGCGGGCGCGGCGGCAACGGCGGGGAAGGCGGCGACGGCCCCCCAGGCGTTAAAGGC
GACGGTGGTAACGGGGGCAACGGCGGCAACGCCGTGGTGATCGGCAACGGCGGCAACGGC
GGGGCCGGCGGCTTCGGCATACCCGTCGGAAGTGGTGGTGCCGGCGGCAGCCGTGGTGTG
CTGTTCGGCACCCCTGGAGCAAACGGCGCCGACGGCTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv2710	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. JH. Lee, PC. Karakousis et al. Roles of SigB and SigF in the Mycobacterium tuberculosis sigma factor network. J. Bacteriol. 2008