Rv2200c - transmembrane cytochrome C oxidase subunit II ctaC

Expression: Most Significant Conditions for Rv2200c

Protein Domains

Gene Information
Locus	Rv2200c
Symbol	ctaC
Gene Name	transmembrane cytochrome C oxidase subunit II ctaC
Location	2463660 - 2464751 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1092 bp Protein:364 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	28447
Related Genes	Acel_0956 CE2087 cg2409 DIP1629 jk0716 MAP1940c MAV_2291 Mkms_3360 ML0875 Mmcs_3298 MSMEG_4268 MT2256 MUL_3557 Mvan_3564 nfa17080 PPA0701 SAV6047
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv2200c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv2200c Transcript 1
MTPRGPGRLQRLSQCRPQRGSGGPARGLRQLALAAMLGALAVTVSGCSWSEALGIGWPEG
ITPEAHLNRELWIGAVIASLAVGVIVWGLIFWSAVFHRKKNTDTELPRQFGYNMPLELVL
TVIPFLIISVLFYFTVVVQEKMLQIAKDPEVVIDITSFQWNWKFGYQRVNFKDGTLTYDG
ADPERKRAMVSKPEGKDKYGEELVGPVRGLNTEDRTYLNFDKVETLGTSTEIPVLVLPSG
KRIEFQMASADVIHAFWVPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCG
TYHSMMNFEVRVVTPNDFKAYLQQRIDGKTNAEALRAINQPPLAVTTHPFDTRRGELAPQ
PVG*

Genomic Sequence

>Rv2200c
GTGACACCTCGCGGGCCAGGTCGTTTGCAACGCTTGTCGCAGTGCAGGCCTCAGCGCGGC
TCCGGAGGGCCTGCCCGTGGTCTTCGACAGCTGGCGCTCGCAGCAATGCTGGGGGCATTG
GCCGTCACCGTCAGTGGATGCAGCTGGTCGGAAGCCCTGGGCATCGGTTGGCCGGAGGGC
ATTACCCCGGAGGCACACCTCAATCGAGAACTGTGGATCGGGGCGGTGATCGCCTCCCTG
GCGGTTGGGGTAATCGTGTGGGGTCTCATCTTCTGGTCCGCGGTATTTCACCGGAAGAAG
AACACCGACACTGAGTTGCCCCGCCAGTTCGGCTACAACATGCCGCTAGAGCTGGTTCTC
ACCGTCATACCGTTCCTCATCATCTCGGTGCTGTTTTATTTCACCGTCGTGGTGCAGGAG
AAGATGCTGCAGATAGCCAAGGATCCCGAGGTCGTGATTGATATCACGTCTTTCCAGTGG
AATTGGAAGTTTGGCTATCAAAGGGTGAACTTCAAAGACGGCACACTGACCTATGATGGT
GCCGATCCGGAGCGCAAGCGCGCCATGGTTTCCAAGCCAGAGGGCAAGGACAAGTACGGC
GAAGAGCTGGTCGGGCCGGTGCGCGGGCTCAACACCGAGGACCGGACCTACCTGAATTTC
GACAAGGTCGAGACGTTGGGCACCAGCACCGAAATTCCGGTGCTGGTGCTGCCGTCCGGC
AAGCGTATCGAATTCCAAATGGCCTCAGCCGATGTGATACACGCATTCTGGGTGCCGGAG
TTCTTGTTCAAGCGTGACGTGATGCCTAACCCGGTGGCAAACAACTCGGTCAACGTCTTC
CAGATCGAAGAAATCACCAAGACCGGAGCATTCGTGGGCCACTGCGCCGAGATGTGTGGC
ACGTATCACTCGATGATGAACTTCGAGGTCCGCGTCGTGACCCCCAACGATTTCAAGGCC
TACCTGCAGCAACGCATCGACGGGAAGACAAACGCCGAGGCCCTGCGGGCGATCAACCAG
CCGCCCCTTGCGGTGACCACCCACCCGTTTGATACTCGCCGCGGTGAATTGGCCCCGCAG
CCCGTAGGTTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Operon Rv3043c	active	harsharohiratruefriend	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	Operon Rv2193	active	harsharohiratruefriend	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2196	active	ashwinigbhat	2012-10-05
	Coexpression BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2195	active	ashwinigbhat	2012-10-05
	Coexpression BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2194	active	ashwinigbhat	2012-10-05
	Coexpression BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2196	active	priti.priety	2012-10-05
	Coexpression BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2195	active	priti.priety	2012-10-05
	Coexpression BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2194	active	priti.priety	2012-10-05
	Coexpression BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2196	active	ashwinigbhat	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2196	active	priti.priety	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2195	active	ashwinigbhat	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2195	active	priti.priety	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2194	active	ashwinigbhat	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv2194	active	priti.priety	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	Operon Rv2193	active	harsharohiratruefriend	2012-10-05
	BD. Kana, EA. Weinstein et al. Characterization of the cydAB-encoded cytochrome bd oxidase from Mycobacterium smegmatis. J. Bacteriol. 2001
Interaction	PhysicalInteraction Rv1451	active	ashwinigbhat	2012-10-05
	Co-occurrence (Functional linkage) authors,M. Strong,TG. Graeber,M. Beeby,M. Pellegrini,MJ. Thompson,TO. Yeates,D. Eisenberg Visualization and interpretation of protein networks in Mycobacterium tuberculosis based on hierarchical clustering of genome-wide functional linkage maps. Nucleic Acids Res. 2003
Interaction	PhysicalInteraction Rv1451	active	priti.priety	2012-10-05
	Co-occurrence (Functional linkage) authors,M. Strong,TG. Graeber,M. Beeby,M. Pellegrini,MJ. Thompson,TO. Yeates,D. Eisenberg Visualization and interpretation of protein networks in Mycobacterium tuberculosis based on hierarchical clustering of genome-wide functional linkage maps. Nucleic Acids Res. 2003
Interaction	RegulatedBy Rv2710	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. JH. Lee, PC. Karakousis et al. Roles of SigB and SigF in the Mycobacterium tuberculosis sigma factor network. J. Bacteriol. 2008
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007