Rv3056 - DNA-damage-inducible protein P dinP

Expression: Most Significant Conditions for Rv3056

Protein Domains

Gene Information
Locus	Rv3056
Symbol	dinP
Gene Name	DNA-damage-inducible protein P dinP
Location	3416705 - 3417745 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1041 bp Protein:347 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	32872
Related Genes	MAP0178c MAP3106 MAV_0172 MAV_3925 Mkms_1859 Mkms_5147 Mmcs_1812 Mmcs_5059 MSMEG_1014 MSMEG_2294 MSMEG_6443 MT3142 MUL_5028 Mvan_2037 Mvan_5685 nfa26700 nfa56150 SAV6556
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv3056
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv3056 Transcript 1
MPTAAPRWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYG
VRAGMPLRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPG
TPDDPIEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMG
DRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTEV
SAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATF
YTRTKIRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA*

Genomic Sequence

>Rv3056
ATGCCGACAGCAGCACCGCGATGGATCCTGCACGTAGACCTCGACCAGTTTTTGGCGTCG
GTCGAACTGCTCCGCCACCCCGAACTGGCAGGTTTGCCGGTCATCGTCGGCGGCAACGGT
GATCCGACCGAACCGCGAAAGGTCGTCACCTGTGCGTCGTATGAGGCCCGCGCCTACGGT
GTGCGCGCCGGCATGCCGTTGCGGACCGCCGCCCGACGATGCCCTGAGGCCACCTTCTTG
CCGTCGAACCCAGCCGCCTACAACGCGGCGTCCGAGGAGGTGGTGGCGTTATTGCGCGAC
CTGGGATACCCGGTCGAGGTATGGGGCTGGGACGAGGCTTACCTCGCGGTGGCGCCCGGG
ACTCCCGACGACCCCATCGAAGTCGCCGAAGAGATCCGAAAAGTCATCTTGTCGCAAACC
GGGCTGTCTTGCTCGATAGGTATCAGTGACAACAAGCAGCGCGCCAAGATCGCTACCGGG
TTGGCGAAACCAGCTGGCATCTATCAGCTCACCGATGCCAACTGGATGGCCATCATGGGT
GACCGTACCGTCGAAGCACTGTGGGGTGTGGGGCCCAAGACTACGAAAAGGCTGGCAAAG
CTTGGGATCAACACCGTTTACCAACTTGCACACACCGATTCCGGGCTATTGATGTCCACG
TTCGGTCCGCGAACCGCGCTGTGGCTGCTGCTGGCCAAAGGCGGAGGCGATACCGAAGTC
AGTGCCCAAGCTTGGGTTCCACGCTCGCGCAGCCACGCCGTCACCTTTCCACGAGACCTC
ACCTGCCGATCCGAAATGGAATCGGCCGTGACGGAATTGGCGCAGCGAACACTCAACGAG
GTGGTGGCTTCGTCGCGAACCGTCACCCGAGTCGCGGTCACCGTGCGCACGGCGACGTTC
TACACCCGCACCAAGATCCGAAAGCTGCAAGCTCCCAGCACCGATCCCGACGTCATCACC
GCTGCCGCCCGGCACGTTCTTGACCTATTCGAGCTGGATCGGCCCGTCCGGTTGCTGGGA
GTGCGGTTAGAACTGGCCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv2710	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. JH. Lee, PC. Karakousis et al. Roles of SigB and SigF in the Mycobacterium tuberculosis sigma factor network. J. Bacteriol. 2008
Other	TBPWY:Translesion synthesis	active	vmizrahi	2012-03-05
	Interacts with beta-clamp. Mutant had no effect on susceptibility to compounds that form N(2)-dG adducts and alkylating agents, no effect on mutation to rifampin resistance or on growth or survival in macrophages or mice
Symbol	dinB2	active	vmizrahi	2012-03-05
	Interacts with beta-clamp. Mutant had no effect on susceptibility to compounds that form N(2)-dG adducts and alkylating agents, no effect on mutation to rifampin resistance or on growth or survival in macrophages or mice