Rv3398c - multifunctional geranylgeranyl pyrophosphate synthetase idsA1

Expression: Most Significant Conditions for Rv3398c

Protein Domains

Gene Information
Locus	Rv3398c
Symbol	idsA1
Gene Name	multifunctional geranylgeranyl pyrophosphate synthetase idsA1
Location	3815027 - 3816106 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1080 bp Protein:360 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	35080
Related Genes	MAP3069 MAV_3884 Mkms_5162 Mmcs_5074 MT3506 MUL_0373 nfa44000
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv3398c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv3398c Transcript 1
MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADRLDPHMRPVVSYHLGWS
DERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEH
RRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAAD
TAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQL
VDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASD
DELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA*

Genomic Sequence

>Rv3398c
ATGCGCGGTACCGACGAAAAGTACGGACTGCCACCGCAACCCGACAGCGACCGTATGACC
CGTCGCACGCTTCCCGTTTTGGGACTCGCACACGAACTCATCACACCGACGCTGCGCCAG
ATGGCTGACCGCCTCGATCCCCACATGCGGCCCGTCGTGTCCTACCACCTCGGCTGGTCT
GATGAACGCGGCCGTCCAGTGAACAACAACTGCGGCAAGGCAATCCGTCCTGCTTTGGTG
TTTGTCGCCGCCGAAGCCGCCGGCGCCGACCCCCACTCGGCGATTCCCGGAGCCGTCTCG
GTTGAACTGGTGCACAACTTCTCGCTCGTCCATGACGACCTCATGGACCGCGACGAGCAC
CGTCGGCACCGGCCGACGGTGTGGGCACTGTGGGGCGATGCGATGGCGCTATTGGCCGGT
GATGCGATGCTGTCGCTGGCGCACGAGGTCCTGCTGGATTGCGATTCACCACACGTCGGT
GCGGCGCTGCGCGCGATTTCGGAAGCCACCCGTGAGTTGATCCGTGGGCAGGCCGCCGAC
ACCGCGTTCGAAAGCCGAACCGACGTCGCACTCGATGAGTGTCTCAAGATGGCTGAAGGC
AAGACCGCAGCACTGATGGCAGCCAGCGCCGAGGTCGGCGCGTTACTCGCTGGCGCACCG
CGTTCGGTGCGAGAAGCGTTGGTTGCCTACGGTCGTCACATTGGACTTGCCTTCCAATTG
GTCGACGACCTGCTCGGCATTTGGGGCCGTCCTGAGATCACCGGCAAGCCGGTGTACTCG
GACCTTCGCTCCCGCAAGAAAACTCTGCCCGTTACCTGGACCGTGGCGCACGGCGGTTCG
GCCGGCCGCCGCCTCGCAGCGTGGCTGGTGGACGAGACGGGCAGCCAGACAGCGTCCGAT
GATGAGCTCGCAGCGGTCGCAGAACTGATCGAGTGCGGTGGGGGGCGCAGGTGGGCAAGC
GCGGAGGCCCGCCGACACGTAACGCAAGGCATCGACATGGTGGCGCGCATCGGCATTCCC
GATCGCCCGGCCGCTGAGCTTCAGGATTTGGCTCACTACATCGTCGATCGTCAGGCGTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv0757	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. SB. Walters, E. Dubnau et al. The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis. Mol. Microbiol. 2006
Name	E,E-farnesyl diphosphate synthase	active	mjackson	2012-10-05
	Prenyl diphosphate synthases
Symbol	idsA	active	mjackson	2012-10-05
	Prenyl diphosphate synthases