Rv3439c - conserved alanine and proline rich protein

Expression: Most Significant Conditions for Rv3439c

Protein Domains

Gene Information
Locus	Rv3439c
Symbol
Gene Name	conserved alanine and proline rich protein
Location	3858259 - 3859662 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1404 bp Protein:468 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	12536
Related Genes	MAP4249 MAV_4382 Mkms_1153 Mmcs_1136 MT3544 MUL_0868 Mvan_1474
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv3439c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv3439c Transcript 1
MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL
DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA
AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ
QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS
VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG
GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG
DDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP
VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP*

Genomic Sequence

>Rv3439c
GTGGCTGACCGGTTGAACGTCGCTGAGCGTCTCGCCGAGGGCAGGCCCGCAGCCGAGCAC
ACGCAAAGCTACGTGCGGGCTTGCCACCTGGTGGGCTACCAACATCCCGACCTGACCGCC
TACCCTGCCCAGATCCACGACTGGTACGGCAGCGAAGACGGACTTGACCTGCACGCGCTC
GACGCTGACTGCGCGCAGCTGCGGGCTGCCGCCAGTGTGCTCATGGAGGCGCTGCGGATG
GAGCGTAGCCAGGTCGCCGTCTTGGCAGCGGCATGGACGGGATCGGGGGCCGACGCGGCG
GTGCACTTTGTGCAGCGTCACTGTGAGACTGGAAATTCGGTGGTCACCGAAGTCCGTGCC
GCGGCCCAACGCTGCGAATCGCTGCGCGACAACCTCTGGCAGCTGGTGGACTCCAAAGTC
GCGACGGCCATTGCGATCGACGAGCGTGCCCTGGCGCAGCGGCCGGCATGGTTGGCTGCG
GCCGAAGCGCTCACGACGGAGGGGGCAGATCGGCCGACGGCCGTCGAAGTGGTTCGCCAA
CAGATACAGCCCTACGTGGACGACGATGTTCGCAACGACTGGCTGACCACGATGCGATCG
ACAACGGCCGGTGTGGCGGCGTCGTATGATGCGGTCACCGATCAGCTGGCCAGCGCGCCG
CGCGCGCACTTCGAGATTCCGGACGATCTCGGGCCCGGTCGCCAACCTTCTCCGGCATCG
GTGCCGGCTCAACCGAGCGCGACGGCAGCGATTACGCCCGCGGCCGCTCTTCCCCCGCCG
GATCCGGTGCCGGCCGTGACCTCGCGGCCAGTGACGCCGTCGGATTTTGGATCGGCGCCA
GGTGATGGTTCCGCGACGCCGGCGGGTGTTGGCAGCGCCGGTGGTTTCGGCGATGCCGGC
GGCACCGGCGGTCTGGGCGGGTTTGCCGGGCTTGCCGGGCTTGCCAACCGGATCGTCGAT
GCGGTGGATAGCCTGCTGGGTTCGGTGGCCGAACAGCTGGGGGATCCGTTGGCAGCTGAC
AATCCGCCGGGTGCCGTCGATCCGTTCGCTGAAGACGCGGCCGACAACGCTGATGACGGC
GACGATGCCCACCCGGAAGAGGCCGACGAGGCAGCGGAGCCGAAGGAAGCAACAGAGCCC
GACGAAGCAGACGAGGTCGACGACGCCGACGAATCGGTGCCCGCTGAACGTGCCCAGGAT
GTCGCCGAGGAGGCCACGCTGCCGCCGGTCGCCGAACCGCCGCCGCCTGCCGCGCCTCCG
GTCGCCGAACCACCGCCTCCGGTCGCTGCGCCGGCGCCGCCGGGTGCGCCGGAACCGGCG
AATGGGCCTTCGCCGGAAGCGCTGTCCGAGGGAGCCACCCCCTGTGAGATCGCCGCCGAC
GAGCTTCCGCAGGCGGGGCCGTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv3911	active	ranjeetsingh	2012-10-05
	Co-expression(Functional Linkage) N. Agarwal, SC. Woolwine et al. Characterization of the Mycobacterium tuberculosis sigma factor SigM by assessment of virulence and identification of SigM-dependent genes. Infect. Immun. 2007
Interaction	RegulatedBy Rv3911	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. S. Raman, X. Puyang et al. Mycobacterium tuberculosis SigM positively regulates Esx secreted protein and nonribosomal peptide synthetase genes and down regulates virulence-associated surface lipid synthesis. J. Bacteriol. 2006
Interaction	RegulatedBy Rv3911	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. N. Agarwal, SC. Woolwine et al. Characterization of the Mycobacterium tuberculosis sigma factor SigM by assessment of virulence and identification of SigM-dependent genes. Infect. Immun. 2007