Rv0043c - transcriptional regulator, gntR-family

Expression: Most Significant Conditions for Rv0043c

Protein Domains

Gene Information
Locus	Rv0043c
Symbol
Gene Name	transcriptional regulator, gntR-family
Location	47366 - 48100 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:735 bp Protein:245 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	37767
Related Genes	MAP0053c MAV_0060 Mkms_5471 Mmcs_5382 MSMEG_6908 MT0049 MUL_0061 Mvan_6046 SAV2008 SAV3285
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv0043c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv0043c Transcript 1
MPKKYGVKEKDQVVAHILNLLLTGKLRSGDRVDRNEIAHGLGVSRVPIQEALVQLEHDGI
VSTRYHRGAFIERFDVATILEHHELDGLLNGIASARAAANPTPRILGQLDAVMRSLRNSK
ESRAFAECVWEYRRTVNDEYAGPRLHATIRASQNLIPRVFWMTYQNSRDDVLPFYEEENA
AIHRREPEAARAACIGRSELMAQTMLAELFRRRVLVPPEGACPGPFGAPIPGFARSYQPS
SPVP*

Genomic Sequence

>Rv0043c
ATGCCAAAAAAGTACGGGGTTAAGGAAAAGGACCAGGTTGTCGCCCACATCCTCAACCTG
CTATTGACCGGCAAACTGCGCAGCGGGGACCGCGTCGACCGCAATGAAATCGCGCACGGC
CTGGGGGTCAGCCGGGTTCCCATCCAAGAGGCGCTGGTTCAACTCGAACACGACGGCATT
GTGTCGACTCGCTATCACCGCGGCGCGTTCATCGAGCGGTTCGACGTCGCCACCATCCTG
GAACATCACGAACTCGACGGCTTGCTCAACGGCATTGCCTCTGCCCGCGCAGCCGCCAAC
CCCACGCCTCGGATCCTGGGCCAGCTCGACGCAGTCATGCGATCGCTGCGCAACTCCAAG
GAGTCGCGGGCCTTCGCCGAATGCGTGTGGGAGTACCGGCGCACGGTCAACGACGAGTAC
GCAGGACCGCGGCTGCACGCCACCATCCGGGCCTCACAGAACCTGATTCCGCGAGTGTTC
TGGATGACATACCAAAACAGCCGCGACGACGTGTTGCCGTTCTACGAGGAAGAGAACGCC
GCAATCCATCGGCGCGAACCTGAAGCTGCGAGGGCTGCCTGCATCGGCCGTTCCGAGCTG
ATGGCCCAGACGATGCTGGCCGAACTGTTCCGCCGCCGAGTATTGGTCCCGCCCGAGGGC
GCTTGTCCCGGCCCGTTTGGGGCGCCGATCCCTGGCTTCGCCAGAAGCTACCAGCCCTCC
TCACCGGTGCCCTAA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007