Rv0116c - conserved membrane protein

Expression: Most Significant Conditions for Rv0116c

Protein Domains

Gene Information
Locus	Rv0116c
Symbol
Gene Name	conserved membrane protein
Location	140267 - 141022 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:756 bp Protein:252 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	30026
Related Genes	MAP3520c MAV_5194 Mkms_2773 ML2664 Mmcs_2729 MSMEG_3528 MT0125 MUL_4806 Mvan_3019
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv0116c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv0116c Transcript 1
MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTF
TTPVTDRRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFE
TGDALIGVASISAHTFTVSRNGEVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTI
GIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDA
VTVGDPIEVVG*

Genomic Sequence

>Rv0116c
ATGCGTCGAGTGGTTCGTTATCTATCCGTTGTGGTCGCGATCACGCTGATGCTCACCGCG
GAATCAGTCAGCATAGCGACCGCCGCGGTCCCGCCACTCCAACCGATCCCAGGCGTTGCG
TCGGTGTCGCCGGCTAATGGTGCCGTGGTGGGGGTGGCGCACCCGGTGGTGGTGACATTC
ACCACGCCCGTGACCGATCGCCGCGCCGTCGAGCGGTCCATCCGCATCAGCACACCGCAC
AACACGACCGGACACTTCGAGTGGGTCGCTAGCAATGTCGTGCGGTGGGTGCCCCACCGG
TATTGGCCACCTCACACCCGTGTCTCGGTGGGTGTGCAGGAACTGACCGAAGGATTCGAG
ACCGGTGACGCACTGATCGGGGTTGCCAGCATCTCGGCACATACCTTCACGGTCAGCAGA
AACGGAGAAGTCCTCCGCACCATGCCCGCGTCGTTAGGCAAGCCCAGCCGCCCGACACCA
ATCGGTAGCTTTCACGCAATGTCCAAGGAGCGCACGGTCGTGATGGACTCGCGTACCATC
GGCATCCCGCTGAATTCCTCGGACGGGTATCTGCTCACCGCCCACTACGCGGTTCGTGTT
ACCTGGAGCGGCGTGTACGTGCACTCGGCCCCCTGGTCGGTCAACTCGCAGGGATACGCC
AACGTCAGCCACGGCTGTATCAACCTCAGCCCGGACAACGCGGCATGGTACTTCGACGCC
GTCACCGTTGGTGATCCCATTGAGGTGGTCGGCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	RegulatedBy Rv0757	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. SB. Walters, E. Dubnau et al. The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis. Mol. Microbiol. 2006
Interaction	RegulatedBy Rv2711	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. GM. Rodriguez, MI. Voskuil et al. ideR, An essential gene in mycobacterium tuberculosis: role of IdeR in iron-dependent gene expression, iron metabolism, and oxidative stress response. Infect. Immun. 2002
Name	L,D-transpeptidase	active	mjackson	2012-10-05
	Peptidoglycan assembly/maturation
Symbol	ldtA	active	mjackson	2012-10-05
	Peptidoglycan assembly/maturation