Rv1627c - nonspecific lipid-transfer protein

Expression: Most Significant Conditions for Rv1627c

Protein Domains

Gene Information
Locus	Rv1627c
Symbol
Gene Name	nonspecific lipid-transfer protein
Location	1828865 - 1830073 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1209 bp Protein:403 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	20463
Related Genes	MAP1320c MAV_3157 Mkms_3061 Mmcs_3015 MSMEG_3844 MT1663 MUL_4955 Mvan_2862 Mvan_3366 nfa22710 SAV6966
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv1627c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv1627c Transcript 1
MRMSAPEPVYILGAGMHPWGKWGNDFTEYGVVAARAALRDAGVDWRHVQLVAGADTIRNG
YPGFVAGATFAQKLGWTGVPVSSSYAACASGSQALQSARAQILAGFCDVALVIGADTTPK
GFFAPVGGERKGDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFAQVKVKNSRHGL
DNPNARYRKENSIDDVLASPVVSDPLRLLDICATSDGAAALIVASKSFTEKHLGSVAGVP
SVRAISTVTPKYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAE
VYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRVPVNPSGGLACFGEAIPAQAIA
QVCELTWQLRGQATGRQVADAKVGVTANQGLFGHGSSVIVAR*

Genomic Sequence

>Rv1627c
ATGAGGATGAGCGCGCCGGAACCCGTTTACATCCTGGGTGCCGGTATGCACCCGTGGGGG
AAATGGGGTAATGACTTCACCGAGTATGGCGTGGTCGCCGCCCGCGCCGCGTTGCGGGAC
GCCGGCGTGGACTGGCGGCACGTGCAGCTGGTCGCCGGAGCGGACACCATCCGCAACGGG
TATCCGGGCTTCGTCGCCGGTGCCACGTTCGCCCAGAAGCTCGGCTGGACCGGTGTGCCG
GTCAGCTCCAGCTACGCCGCGTGTGCCAGCGGTTCCCAAGCGCTGCAGAGTGCTCGCGCG
CAGATCTTGGCCGGTTTCTGTGACGTGGCGCTGGTGATCGGCGCCGACACCACACCGAAG
GGCTTTTTCGCGCCCGTGGGCGGCGAGCGCAAGGGCGACCCCGACTGGCAGCGCTTCCAT
CTGATCGGGGCGACGAACACGGTGTACTTCGCGCTGCTGGCGCGCCGGCGCATGGACCTG
TACGGCGCCACAGTCGAGGACTTCGCTCAAGTGAAGGTCAAGAACTCCCGGCACGGCCTA
GACAACCCGAACGCCCGCTACCGCAAAGAGAACTCGATCGACGACGTGCTGGCTAGCCCG
GTGGTCTCGGATCCGCTTCGGCTGCTTGACATCTGCGCCACCTCCGACGGTGCGGCCGCA
CTCATCGTGGCCAGCAAGTCTTTCACCGAGAAGCACCTTGGCTCGGTGGCGGGCGTGCCG
TCGGTGCGCGCGATCAGCACCGTTACCCCGAAATACCCGCAACATTTGCCCGAATTGCCG
GATATCGCAACGGATTCCACCGCCGCGGTGCCGGCTCCGGAGCGGGTGTTCAAGGATCAG
ATCCTCGACGCTGCCTACGCGGAGGCCGGTATTGGTCCAGAAGACTTAAGCCTGGCCGAG
GTCTACGACCTGTCCACCGCGTTGGAACTCGACTGGTACGAACACCTGGGGCTCTGCCCC
AAGGGTGAGGCCGAGGCGCTGCTGCGCAGCGGCGCGACCACCCTCGGCGGCAGGGTCCCG
GTCAACCCGTCGGGCGGGCTGGCGTGTTTCGGTGAGGCGATTCCCGCCCAGGCGATCGCG
CAGGTCTGCGAGCTGACCTGGCAGCTGCGCGGTCAGGCCACCGGCCGGCAGGTGGCGGAC
GCCAAGGTCGGCGTCACCGCCAACCAGGGCCTGTTCGGGCACGGCTCGTCGGTGATCGTC
GCGCGCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv3574	active	priyadarshinipriyanka2001	2012-10-05
	Co-expression (Functional linkage) SL. Kendall,P. Burgess,R. Balhana,M. Withers,A. Ten Bokum,JS. Lott,C. Gao,I. Uhia Castro,NG. Stoker Cholesterol utilisation in mycobacteria is controlled by two TetR-type transcriptional regulators; kstR and kstR2. Microbiology (Reading, England) 2010
Interaction	Regulatory Rv3574	active	priyadarshinipriyanka2001	2012-10-05
	Co-expression (Functional linkage) SL. Kendall, M. Withers et al. A highly conserved transcriptional repressor controls a large regulon involved in lipid degradation in Mycobacterium smegmatis and Mycobacterium tuberculosis. Mol. Microbiol. 2007
Interaction	RegulatedBy Rv3574	active	yamir.moreno	2012-10-05
	M.smegmatis orthology based inference. Orthologous pair regulator-target found in M.smegmatis. SL. Kendall, M. Withers et al. A highly conserved transcriptional repressor controls a large regulon involved in lipid degradation in Mycobacterium smegmatis and Mycobacterium tuberculosis. Mol. Microbiol. 2007
Interaction	RegulatedBy Rv3574	active	yamir.moreno	2012-10-05
	Literature previously reported link (from Balazsi et al. 2008). Traceable author statement to experimental support. G. Balázsi, AP. Heath et al. The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. Mol. Syst. Biol. 2008