Rv2884 - transcriptional regulator

Expression: Most Significant Conditions for Rv2884

Protein Domains

Gene Information
Locus	Rv2884
Symbol
Gene Name	transcriptional regulator
Location	3193393 - 3194151 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:759 bp Protein:253 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	33397
Related Genes	MAP2948 MAV_3735 MT2952 MUL_2073
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv2884
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv2884 Transcript 1
MPTGPTTGKWHPHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGAD
ADVAIIDARADLAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGA
ELQARLRLAITRRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAG
RAFTRTRLMREVWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPR
WIISESILNRCK*

Genomic Sequence

>Rv2884
ATGCCTACGGGCCCCACGACGGGGAAGTGGCACCCTCATGAAGTTTGGAGATATCTCTTG
GAAGTTCTACTTCTTACCGATGAAGCCGATCTTGAATCGGCTCTGCCGGAGCTGGAGTCG
TTCGCGCAGTCGGTGCAGCGCGCACCGCTGGACGACCCGGGCGCGGCCAAGGGTGCGGAC
GCCGATGTCGCGATCATTGACGCGCGCGCCGACTTGGCGGCCGCTCGCCGGGTGTGCCGC
CGGCTGACGACTAGCGCACCAGCCCTTGCCGTGGTGGCTGTTGTTGCGCCGGCCAACTTT
GTGGCAGTGGACGGCGATTGGATATTCGATGACGTGCTGTTGAACGCGGCCGGCGGGGCC
GAGCTGCAGGCACGGTTGCGGTTGGCGATCACACGTCGACGGAGCACGCTAGCGGGCACA
CTGCAATTCGGGGACCTCGTCCTTCACCCAGCCAGCTACACCGCGTCGCTGGGCGACCGG
GACCTGGGGCTGACGCTCACCGAATTCAAACTCATGAATTTCCTTGTGCAGCATGCCGGT
CGGGCGTTCACCCGGACTCGGCTCATGCGTGAGGTGTGGGGCTATGAGTGCCATGGTCGC
ATTCGTACCGTCGATGTTCACGTACGACGACTGCGCGCAAAGCTCGGAGCCGAGCACGAA
TCGATGATCGACACCGTTCGCGGTGTGGGTTATATGGCGGTGACGCCACCGCAGCCGCGC
TGGATCATCAGCGAATCGATACTAAACCGTTGCAAGTGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv3286c	active	ashwinigbhat	2012-10-05
	Invitro transcription analysis (Functional Analysis) D. Homerová, K. Surdová et al. Optimization of a two-plasmid system for the identification of promoters recognized by RNA polymerase containing Mycobacterium tuberculosis stress response sigma factor, sigmaF. Folia Microbiol. (Praha) 2004
Interaction	Regulatory Rv3286c	active	ashwinigbhat	2012-10-05
	Invitro transcription analysis (Functional Analysis) EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. qRT-PCR. mRNA expression levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using qRT-PCR technique. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007
Interaction	RegulatedBy Rv3286c	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. qRT-PCR. mRNA expression levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using qRT-PCR technique. EP. Williams, JH. Lee et al. Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1. J. Bacteriol. 2007