Rv3270 - metal cation transporting P-type ATPase ctpC

Expression: Most Significant Conditions for Rv3270

Protein Domains

Gene Information
Locus	Rv3270
Symbol	ctpC
Gene Name	metal cation transporting P-type ATPase ctpC
Location	3650526 - 3652682 (+)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:2157 bp Protein:719 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	35636
Related Genes	BL1038 CE1940 cg0569 MAP3384 MAV_4235 ML0747 MT3370 MUL_2616
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv3270
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv3270 Transcript 1
MTLEVVSDAAGRMRVKVDWVRCDSRRAVAVEEAVAKQNGVRVVHAYPRTGSVVVWYSPRR
ADRAAVLAAIKGAAHVAAELIPARAPHSAEIRNTDVLRMVIGGVALALLGVRRYVFARPP
LLGTTGRTVATGVTIFTGYPFLRGALRSLRSGKAGTDALVSAATVASLILRENVVALTVL
WLLNIGEYLQDLTLRRTRRAISELLRGNQDTAWVRLTDPSAGSDAATEIQVPIDTVQIGD
EVVVHEHVAIPVDGEVVDGEAIVNQSAITGENLPVSVVVGTRVHAGSVVVRGRVVVRAHA
VGNQTTIGRIISRVEEAQLDRAPIQTVGENFSRRFVPTSFIVSAIALLITGDVRRAMTML
LIACPCAVGLSTPTAISAAIGNGARRGILIKGGSHLEQAGRVDAIVFDKTGTLTVGRPVV
TNIVAMHKDWEPEQVLAYAASSEIHSRHPLAEAVIRSTEERRISIPPHEECEVLVGLGMR
TWADGRTLLLGSPSLLRAEKVRVSKKASEWVDKLRRQAETPLLLAVDGTLVGLISLRDEV
RPEAAQVLTKLRANGIRRIVMLTGDHPEIAQVVADELGIDEWRAEVMPEDKLAAVRELQD
DGYVVGMVGDGINDAPALAAADIGIAMGLAGTDVAVETADVALANDDLHRLLDVGDLGER
AVDVIRQNYGMSIAVNAAGLLIGAGGALSPVLAAILHNASSVAVVANSSRLIRYRLDR*

Genomic Sequence

>Rv3270
ATGACCCTGGAAGTGGTATCGGACGCGGCCGGACGCATGCGGGTCAAAGTCGACTGGGTC
CGTTGCGATTCCCGGCGCGCGGTCGCGGTCGAAGAGGCCGTTGCCAAGCAGAACGGTGTG
CGCGTCGTGCACGCCTACCCGCGCACCGGGTCCGTGGTCGTGTGGTATTCACCCAGACGC
GCCGACCGCGCGGCGGTGCTGGCGGCGATCAAGGGCGCCGCGCACGTCGCCGCCGAACTG
ATCCCCGCGCGTGCGCCGCACTCGGCCGAGATCCGCAACACCGACGTGCTCCGGATGGTC
ATCGGCGGGGTGGCACTGGCCTTGCTCGGGGTGCGCCGCTACGTGTTCGCGCGGCCACCG
CTGCTCGGAACCACCGGGCGGACGGTGGCCACCGGTGTCACCATTTTCACCGGGTATCCG
TTCCTGCGTGGCGCGCTGCGCTCGCTGCGCTCCGGAAAGGCCGGCACCGATGCCCTGGTC
TCCGCGGCGACGGTGGCAAGCCTCATCCTGCGCGAGAACGTGGTCGCACTCACCGTCCTG
TGGTTGCTCAACATCGGTGAGTACCTGCAGGATCTGACGCTGCGGCGGACCCGGCGGGCC
ATCTCGGAGCTGCTGCGCGGCAACCAGGACACGGCCTGGGTGCGCCTCACCGATCCTTCT
GCAGGCTCCGACGCGGCCACCGAAATCCAGGTCCCGATCGACACCGTGCAGATCGGTGAC
GAGGTGGTGGTCCACGAGCACGTCGCGATACCGGTCGACGGTGAGGTGGTCGACGGCGAA
GCGATCGTCAATCAGTCCGCGATCACCGGGGAAAACCTGCCGGTCAGCGTCGTGGTCGGA
ACGCGCGTGCACGCCGGTTCGGTCGTGGTGCGCGGACGCGTGGTGGTGCGCGCCCACGCG
GTAGGCAACCAAACCACCATCGGTCGCATCATTAGCAGGGTCGAAGAGGCTCAGCTCGAC
CGGGCACCCATCCAGACGGTGGGCGAGAACTTCTCCCGCCGCTTCGTTCCCACCTCGTTC
ATCGTCTCGGCCATCGCGTTGCTGATCACCGGCGACGTGCGGCGCGCGATGACCATGTTG
TTGATCGCATGCCCGTGCGCGGTGGGACTGTCCACCCCGACCGCGATCAGCGCAGCGATC
GGCAACGGCGCGCGCCGTGGCATCCTGATCAAGGGCGGATCCCACCTCGAGCAGGCGGGC
CGCGTCGACGCCATCGTGTTCGACAAGACCGGGACGTTGACCGTGGGCCGCCCCGTGGTC
ACCAATATCGTTGCCATGCATAAAGATTGGGAGCCCGAGCAAGTGCTGGCCTATGCCGCC
AGCTCGGAGATCCACTCACGTCATCCGCTGGCCGAGGCGGTGATCCGCTCGACGGAGGAA
CGCCGCATCAGCATCCCACCACACGAGGAGTGCGAGGTGCTGGTCGGCCTGGGCATGCGG
ACCTGGGCCGACGGTCGGACCCTGCTGCTGGGCAGTCCGTCGTTGCTGCGCGCCGAAAAA
GTTCGGGTGTCCAAGAAGGCGTCGGAGTGGGTCGACAAGCTGCGCCGCCAGGCGGAGACC
CCGCTGCTGCTCGCGGTGGACGGCACGCTGGTCGGCCTGATCAGCCTGCGCGACGAGGTG
CGTCCGGAGGCGGCCCAGGTGCTGACGAAGCTGCGGGCCAATGGGATTCGCCGGATCGTC
ATGCTCACCGGCGACCACCCGGAGATCGCCCAGGTTGTCGCCGACGAACTGGGGATTGAT
GAGTGGCGCGCCGAGGTCATGCCGGAGGACAAGCTCGCGGCGGTGCGCGAGCTGCAGGAC
GACGGCTACGTCGTCGGGATGGTCGGCGACGGCATCAACGACGCCCCGGCGCTGGCCGCC
GCCGATATCGGGATCGCCATGGGCCTTGCCGGAACCGACGTCGCCGTCGAGACCGCCGAT
GTCGCGCTGGCCAACGACGACCTGCACCGCCTGCTCGACGTTGGGGACCTGGGCGAGCGG
GCAGTGGATGTAATCCGGCAGAACTACGGCATGTCCATCGCCGTCAACGCGGCCGGGCTG
CTGATCGGCGCGGGCGGTGCGCTCTCGCCGGTGCTGGCGGCGATCCTGCACAACGCGTCG
TCGGTGGCGGTGGTGGCCAACAGTTCCCGGTTGATCCGCTACCGCCTGGACCGCTAG

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	PhysicalInteraction Rv3269	active	vashishtrv	2012-10-05
	Gene neighborhood (Functional linkage) authors,JJ. De Voss,K. Rutter,BG. Schroeder,CE. Barry Iron acquisition and metabolism by mycobacteria. J. Bacteriol. 1999
Interaction	PhysicalInteraction Rv3269	active	shahanup86	2012-10-05
	Gene neighborhood (Functional linkage) authors,JJ. De Voss,K. Rutter,BG. Schroeder,CE. Barry Iron acquisition and metabolism by mycobacteria. J. Bacteriol. 1999
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) ML. Chesne-Seck, N. Barilone et al. A point mutation in the two-component regulator PhoP-PhoR accounts for the absence of polyketide-derived acyltrehaloses but not that of phthiocerol dimycocerosates in Mycobacterium tuberculosis H37Ra. J. Bacteriol. 2008
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) authors,A. Sola-Landa,RS. Moura,JF. Martín The two-component PhoR-PhoP system controls both primary metabolism and secondary metabolite biosynthesis in Streptomyces lividans. Proc. Natl. Acad. Sci. U.S.A. 2003
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) J. Gonzalo Asensio, C. Maia et al. The virulence-associated two-component PhoP-PhoR system controls the biosynthesis of polyketide-derived lipids in Mycobacterium tuberculosis. J. Biol. Chem. 2006
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) J. Gonzalo-Asensio, CY. Soto et al. The Mycobacterium tuberculosis phoPR operon is positively autoregulated in the virulent strain H37Rv. J. Bacteriol. 2008
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) A. Sinha, S. Gupta et al. PhoP-PhoP interaction at adjacent PhoP binding sites is influenced by protein phosphorylation. J. Bacteriol. 2008
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) J. Gonzalo Asensio, C. Maia et al. The virulence-associated two-component PhoP-PhoR system controls the biosynthesis of polyketide-derived lipids in Mycobacterium tuberculosis. J. Biol. Chem. 2006
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) M. Ryndak, S. Wang et al. PhoP, a key player in Mycobacterium tuberculosis virulence. Trends Microbiol. 2008
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) JA. Asensio, A. Arbués et al. Live tuberculosis vaccines based on phoP mutants: a step towards clinical trials. Expert opinion on biological therapy 2008
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) SB. Walters, E. Dubnau et al. The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis. Mol. Microbiol. 2006
Interaction	Regulatory Rv0757	active	singhpankaj2116	2012-10-05
	Co-expression (Functional linkage) J. Gonzalo-Asensio, S. Mostowy et al. PhoP: a missing piece in the intricate puzzle of Mycobacterium tuberculosis virulence. PLoS ONE 2008
Interaction	RegulatedBy Rv0757	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. J. Gonzalo Asensio, C. Maia et al. The virulence-associated two-component PhoP-PhoR system controls the biosynthesis of polyketide-derived lipids in Mycobacterium tuberculosis. J. Biol. Chem. 2006