Rv3402c - conserved hypothetical protein

Expression: Most Significant Conditions for Rv3402c

Protein Domains

Gene Information
Locus	Rv3402c
Symbol
Gene Name	conserved hypothetical protein
Location	3820653 - 3821891 (-)
Species	Mycobacterium tuberculosis H37Rv complete genome.
Length	Gene:1239 bp Protein:413 aa
External Links	Tuberculist Target Gene Information String Protein-Protein Interactions STITCH Chemical-Protein Interactions Search Google Scholar
Orthologs
Orthogroup Number	28189
Related Genes	Acel_1934 Acel_1938 cg0418 MT3510 nfa33500 PPA0135 Rv1503c Rv1504c SAV2514 SAV834
Transcriptional Regulation
Operons	View gene in operon browser
Regulatory Network	Search for regulators of Rv3402c
Expression Correlation	Genes with Correlated Expression Scatterplot of Gene Expression

Sequence

Proteins

>Rv3402c Transcript 1
MKIRTLSGSVLEPPSAVRATPGTSMLKLEPGGSTIPKIPFIRPSFPGPAELAEDFVQIAQ
ANWYTNFGPNERRFARALRDYLGPHLHVATLANGTLALLAALHVSFGAGTRDRYLLMPSF
TFVGVAQAALWTGYRPWFIDIDANTWQPCVHSARAVIERFRDRIAGILLANVFGVGNPQI
SVWEELAAEWELPIVLDSAAGFGSTYADGERLGGRGACEIFSFHATKPFAVGEGGALVSR
DPRLVEHAYKFQNFGLVQTRESIQLGMNGKLSEISAAIGLRQLVGLDRRLASRRKVLECY
RTGMADAGVRFQDNANVASLCFASACCTSADHKAAVLGSLRRHAIEARDYYNPPQHRHPY
FVTNAELVESTDLAVTADICSRIVSLPVHDHMAPDDVARVVAAVQEAEVRGE*

Genomic Sequence

>Rv3402c
ATGAAGATCCGAACGTTATCCGGCTCGGTGCTGGAGCCGCCGTCCGCAGTACGCGCGACC
CCAGGCACGTCCATGTTAAAACTCGAGCCGGGTGGCTCGACGATCCCCAAGATCCCCTTC
ATCCGCCCGAGCTTTCCCGGGCCAGCCGAGCTCGCCGAGGACTTCGTACAGATCGCCCAG
GCTAACTGGTACACGAACTTCGGTCCGAACGAGCGGCGGTTTGCCCGCGCCCTGCGCGAC
TATCTGGGACCTCATCTGCACGTTGCTACCCTCGCCAACGGCACCCTGGCACTCCTCGCG
GCGCTCCACGTCAGTTTCGGCGCCGGTACGCGGGACCGCTACCTGCTGATGCCGTCGTTC
ACGTTCGTCGGCGTGGCTCAGGCTGCGCTATGGACTGGGTACCGTCCCTGGTTCATCGAC
ATCGACGCCAACACATGGCAGCCATGCGTCCACTCCGCCCGCGCCGTCATCGAACGCTTC
CGCGACCGGATCGCCGGCATCCTGCTGGCCAATGTGTTCGGCGTCGGCAATCCCCAGATC
AGCGTCTGGGAGGAGCTCGCCGCCGAATGGGAGCTACCGATTGTGCTCGACTCGGCGGCC
GGCTTCGGCTCCACGTACGCCGACGGCGAGCGCCTCGGTGGACGCGGTGCATGCGAGATC
TTCTCCTTCCATGCGACCAAGCCGTTCGCGGTTGGTGAGGGCGGCGCTCTGGTTTCTCGC
GATCCACGGCTCGTCGAGCACGCATACAAGTTCCAGAACTTCGGCTTGGTGCAAACACGC
GAGTCCATCCAGCTCGGAATGAACGGCAAGCTGTCGGAGATCAGCGCCGCTATTGGCCTA
CGCCAACTAGTCGGGCTTGATCGCCGCCTGGCAAGTCGCCGCAAGGTCCTCGAGTGCTAT
CGCACCGGTATGGCCGACGCGGGTGTGCGTTTCCAGGACAACGCCAATGTTGCGTCGCTC
TGTTTCGCGAGCGCTTGCTGCACGTCCGCCGACCACAAGGCCGCGGTTCTGGGTAGCCTG
CGTAGGCACGCGATCGAGGCGCGCGACTACTACAACCCACCGCAGCACCGACATCCGTAC
TTTGTGACGAATGCCGAGTTAGTCGAGTCGACCGATCTAGCCGTCACGGCGGACATTTGC
TCGCGAATCGTGTCGCTGCCAGTCCACGACCACATGGCCCCGGATGACGTTGCCCGGGTC
GTCGCCGCCGTGCAGGAAGCGGAGGTGCGCGGTGAATGA

Community Annotations Pending Curatorial Review

Field	Value	Status	Creator	Date
Interaction	Regulatory Rv2711	active	harsharohiratruefriend	2012-10-05
	Band shift B. Gold, GM. Rodriguez et al. The Mycobacterium tuberculosis IdeR is a dual functional regulator that controls transcription of genes involved in iron acquisition, iron storage and survival in macrophages. Mol. Microbiol. 2001
Interaction	RegulatedBy Rv0757	active	yamir.moreno	2012-10-05
	Microarrays. mRNA levels of regulated element measured and compared between wild-type and trans-element mutation (knockout, over expression etc.) performed by using microarray (or macroarray) experiments.. SB. Walters, E. Dubnau et al. The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis. Mol. Microbiol. 2006
Interaction	RegulatedBy Rv2711	active	yamir.moreno	2012-10-05
	Literature previously reported link (from Balazsi et al. 2008). Traceable author statement to experimental support. G. Balázsi, AP. Heath et al. The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. Mol. Syst. Biol. 2008